| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23180 |
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| Symbol | |
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| ID | 8387642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2494828 |
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| End bp | 2500320 |
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| Gene Length | 5493 bp |
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| Protein Length | 1830 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976371 |
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| Product | acetyl/propionyl-CoA carboxylase, alpha subunit |
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| Protein accession | YP_003134153 |
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| Protein GI | 257056321 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.97809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.111796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCGTC GCGTCGCCAT CGTCAACCGT GGGGAAGCCG CGATGCGGCT CGTCCACGCA
GTCAAGGAAC ATAACGCCGA GGGCGGGTCG CGACTGGAGA CCGTGGCGTT CTACACCGAC
GCCGACCGGG AGGCCACGTT CGTCAGGGAG GCCGACCACG CCTACTGCCT CGGACCTGCG
TCCACGCGTC CGTACCTGAA TCTGGGGATC CTGGAGCAGG CGTTACGGGA GACGGAGGCC
GACGCCGCGT GGGTCGGATG GGGCTTCGTG GCCGAGGATC CCGCCTTCGC GGAGCTGTGC
GACCGGCTCG GGGTGACTTT CATCGGTCCG AGTGCGGAGG CCATGCGCAA ACTCGGCGAC
AAGATCGGCG CCAAACTCCT CGCGGAGGAA GTCGGTGTGC CCGTCGCCCC CTGGAGTCGG
GGGCCGGTGG AGGATCTCGA CGCCGCCCGC GCCGCCGCCG AGCGGATCGG TTATCCGCTC
ATGCTCAAGG CCACCGCGGG CGGTGGTGGC CGGGGGATCC GGGTGGTGTC GTCCGAAGCC
GAGCTCGTCG ACGCTTACGA GCGCACCCGG TCGGAGGCCG AGCGTGCCTT CGGCAGCGGC
GTCGTGTTCC TGGAACGTCT CGTCACCGGT GCCCGACACG TCGAGGTGCA GGTCATCGCC
GACGGCCAGG GCACCGCGTG GGCCCTGGGC GTGCGTGACT GCTCGGTGCA GCGACGCAAT
CAGAAGGTCA TCGAGGAGTC GGCGTCGCCG CTGTTGACGC CCGAACAAAC CGAGGAACTC
AAGGCGTCGG CCGAACGCCT GGCGCTCGCA GTGGGGTACC GGGGCGCGGC CACCGTGGAG
TTCCTCTACC AACCTGCGGA GAAGCTGTTC GCCTTCCTCG AGGTCAACAC CCGGCTGCAG
GTGGAACACC CGATCACCGA GGCCACCACC GGTATGGACC TGGTGAAGGC GCAGCTGCAC
GTGGCCGCGG GGGGCACACT CGACGGTCAG CGGCCACGGG AGATCGGGCA TGCGGTGGAG
GCGAGGCTCA ACGCGGAGGA CCCCGATCGC GATTTCGCTC CCGCGCCGGG GCGGATCAGC
CTGTTGAACT TCCCTTCCGG ACCCGGTATC CGTGTCGACA CCGGAGTCAG CGAGGGCGAC
ACGATCCCGG CCGACTTCGA CTCCATGATC GCGAAGATCA TCGCCTACGG TCGGGACCGG
GACGAGGCCC TGGCCCGGTT GCGCCGCGCG GTGGCGGACA CGGACGTGCT CATCGAAGGC
GGGTCGACGA ACAAGAGCTT CCTGCTCGAT CTGCTCGATG CGCCTGAGGT GATCGACGGC
AGCGCCGACA CCGGGTGGAT CGACAGGATG CGGGCACAAG GACGGTTGCA GGCCACCCGC
CACTCGGGCG TGGCGTTGGC CGTGGCCGCG ATCGACGCCT ACACGGAGGC CGAACAGGCC
GAGCAGCAAC ACCTGTTGTC CACCGCGCGT GGCGGACGGC CGCAGGTGCG ACACACCGGC
AGCCGTGCCG TGGAGCTGAA ACTGCGGGGC ACGAGCTACC GGATCACCGT GGCTCGCACC
GCGCCGCAGC GGTTCAGGGT CGAAATCGAG GACGGGCCGA CGGCGCACAC GGTCGACGTC
GAGATCGAAC GGCACGGCAC CGCCACGGGG CAGCTGCTGG TCCACGGACG TCGATACCGG
TTCGTCACGG GAACCCACGG ACCCGTTCAC GTGGTCGAGA TCGACGGCAC GGTCCACCGC
ATCAGTCGCG ACGAGGGCGG CATCGTCCGT TCGCCCGCTC CCGCCTTGGT GGTGGCGGCT
CCCGTGGACG TCGGCTCCGA GGTCGAGGCG GGTGCTCCCG TGCTCGTGCT GGAGAGCATG
AAGATGGAGA CGGTGCTACG GGCGCCCTTC CGGGCCGTGC TGCGGGAACG TCCCGTGTCG
GTCGGCAGCC AGGTGGAGGC CGGAGCGCCG CTGTTGCGAC TGGAACCACT GGATACCGAC
GAGGTCGACG CGGACGCTGG TGGTCAGCGG GAGGATCTCG GGATCCCACC CCGGGTCGAG
GCGGTCGACG CCGAACAGCG GGCGGAACGG GCGCGTGCCG AGCTGCGCAG CCGTCTGTTG
GGGTACGACC TCGACCTCGA CGACGAGGCC CGGGCGCTGG ACGACTACCT CGCCGCGCGT
GCCGAACTCG TCGAGGCGGG CCGCAGGCCG GTGAAGGCCG AAGGGGAGCT GCTGCGGGTG
TTCGCCGACC TGTCGGAGCT CAGTCGCAAC AAACCCGTGG ACGGCGAGGG CTCGGCCAGC
ACCAGGCTGC ACAGTCCCCA CGAGTACTTC CACACGTATC TGCAGAGCCT GGATGTGGAC
AGGGCCGGGT TGTCGGAGGT GTTCCAGCAG CGACTGACCC GGGCGCTCGC GCACTACGGT
GTGACCGACC TGGAACAGGG GCCCGAGCTC ACCGAGGCGG TGTTCCGTCT GTTCTGCGTC
CACCAGCGTG CGGGTGGCGA CATCGGTGTG GTGACCGCTC TGCTGCGGCA GTGGCTCGCC
GAACCCGCGC CCGAACAGTC GGTGCGGGAG ACGATCGGCC ACGTGCTGGA GCACGTGGTC
GTGGCCACCC AGGTGCGGTT CCCCGTGGTG GCCGATCTCG CCCGCAGCGT GGTGTTCCGA
TGGTTCGCGC AGCCGATGCT GCGTCGGAGG CGTGCCGAGC TCTACGCGAA CGTGCGGCGC
CACCTCCGTT ACCTCGACGC CCACCCGGAC GCGGCCGACC GCTCCGAGCG GATCGCCGAG
ATGGTCTCGT GCTCCGAACC TCTGGTACGG GTGCTCGGCC AGCGGATCCA CCGACAGGGC
GCCGATCTCG GCCCGCTGTT GGAGGTCATA CTCCGGCGTT ACTACCGGGA CCGGTCGTTG
GCGAACGTTC AGGTCCGTCG AGTGGCGGAC TTCTCGTGCG TGACAGCGGA TTACGAGCTC
GACTCCGAAC GCGTGCGGGT GGTGTCCACA GCGGCCGATC CCCAGCGGGT GGTCGACGCT
TTGCACGCGG TCTCCGAGGC CGCGGACGAC GCGACGGACA CCGGGCTCGT CGTGGACCTG
TATCTGTCCT GGTCGGACGA ATTCGCCGAC GACGACACCG CCGCCGCGAA GCTGCTCGCC
ACGCTCACCG AGGTGTCGTT GCCGGACTCG GTGCGCCGTG TCACCACGAC CGTGGCGGGA
CGCAGCGGGT CGGTGATGCA CCACCACTAC ACGTTCCGGG CGTCGGCCTC GGGTTTGGTC
GAGGACCGGT TGATCCGAGG TCTGCACCCG CTGGTCGCGC AGCGACTGCA ACTGCGCCGC
TTCAGCGAGT TCGACCTCAC CCGGCTGCCC TCGGCCGACG AGGAGGTCTA CCTGATGCGG
TGCGTCGCGC CGGACAATCC GTCCGACGAA CGGTTCGTGG CACTGGCACA GGTGCGGGAC
CTCACGCCGC TGCGGGATTC CCAGGGCCGC CTGGTCGCGT TGCCCGCCGT GGAGGGGACG
CTGGCCGCCT GCCTCGACGC CATCCGTGCG CAGCAGGTGC GGCGGCCCGT GAAGAAGCGC
CTCGACACCA ACCGTGTCGT GATCTACGTG TGGCCTCCGA TCGAGCTGAC CACCGAGGAG
TTGCGTGCGG TGGCGAACCG GGTGGTGCCC ACCACGACCG GCGCGGGGGT CGAGGAGGTC
GAGTTCCTCG GCCGGCGGCG TGACCCTGAG ACCGGTGCCA CGCGGGACGT CGCGGTGCTC
ATCACCCACA ACCCCGGTTC CGGGGTGAGC GTGCGCATGA CCACGCCGTC CACCGAGGTG
ATCCGGCCGC TCGACGCCTA TGGGCAGAAG GTCCTGCGTG CGCGGCGGCG CAACACCGTG
TACCCGTACG AACTGGTCGA GCTGGTCGCG GGCAAGAACG GCACGTTCGT GGAGTACGAC
CTCGACGACG AGGGCGAGCT CGTGCCTGTC GACAGGCCGA AGGGCGGCAA CACGGCCGGG
ATCGTCGTCG GTGTGGTCAC CACGCCGACG AAGCTCTACC CGGAGGGAGT GACCCGTGTG
GTGTTGCTGG GCGATCCCAC CAAGTCGTTG GGTGCCCTCG CGGAGCCGGA GTGCGCCCGG
GTGATCGCGG CCCTCGACCT GGCCGAGCGC ATGCGTGTTC CGGTGGAGTG GTTCGCCCTG
TCGGCCGGTG CGCGTATCGC CATGGACTCC GGTACGGAGA ACATGGACTG GGTGGCGGCC
GCGCTGAAGC GCATCGTGCA CTTCACCCAG GACGGTGGGG AGATCAACGT CGTGGTGGCC
GGTATCAACG TCGGTGCGCA GCCGTACTGG AATGCCGAGG CCACCATGCT CATGCACACC
AAGGGCATCC TCGTGATGAC GCCGGACTCG GCGATGGTGC TCACCGGTAA ACAGTCGCTG
GACTTCTCGG GTGGGGTGTC CGCCGAGGAC AACTTCGGGA TCGGCGGCTA CGACCGGGTG
ATGGGGCCGA ACGGTCAGGC CCAGTACTGG GCTCCGAACC TCGCGGGGGC CTGTGACGTG
CTCCTGTCGC ACTACGAGCA CACCTATGTG GTCCCGGGTG AGCGCGGACC GCGGCGGGCC
GAGACCACCG ACCCCCGCGA CCGTGACGTC CGCGACTACC CCCACAACGT GGTGGACAGC
GAGTTCACCA CGGTCGGGGA GATCTTCTCC GCCGAGAAGA ACCCGGACCG GAAGAAGCCG
TTCGACATCC GCACGGTGAT GCGGGCGGTC GCCGACGCCG ACCACCCCGT GTTGGAGCGC
TGGGCGGGGA TGGCCGACGC CGAAACCGCC GTGGTGCAGG ACGCGCGCCT CGGTGGTTGG
CCGGTGTGTC TGGTGGGTAT CGAGTCGCGG TCGGTACCGC GTCGCGGTTT CCCGCCGACG
GACGGTCCCG ACACCTACAC GGCGGGCACG TTGTTCCCGC GCTCGTCGAA GAAGGTGGCA
CGGGCCATCA ACGCGGCCAG CGGAAACCGG CCGCTCGTGG TGTTGGCGAA CCTGTCCGGC
TTCGACGGTT CTCCCGAGTC GATGCGCAAG CTCCAGTTGG AGTACGGAGC CGAGATCGGC
CGCGCCATCG TGAACTTCGA GGGACCGATC GTGTTCTGCG TGATCTCGCG CTATCACGGT
GGTGCGTTCG TGGTGTTCTC GAAGGCACTG AACCCGAACA TGACGGTGCT GGCGGTGGAG
GGTTCGTTCG CCTCGGTGCT CGGGGGTGCC CCGGCAGCGG CCGTGGTGTT CTCCGGCGAG
GTCGACGCCC GCACGGCCGC CGACGAGCGG GTCCGGAAGC TCGAGGAGCG GCTCACCCGG
GCCGACGACG AGGAGCGCGC CGAGTTGGCG ACGCGACTGG CCGAGGTCAA GGCATCGGTG
CGGGCGGAGA AGCTCGGCGA GGTCGCGGCC GAGTTCGACA ACGTGCACTC CATCCAGCGG
GCCGTCGAGG TGGGTTCGGT GGATGCGGTG ATCCCGCCCG AGTCGTTGCG GCCGGAGCTC
ATCGCCGCGG TGGAGCGCGG ACTGCGCCGC TGA
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| Protein sequence | MFRRVAIVNR GEAAMRLVHA VKEHNAEGGS RLETVAFYTD ADREATFVRE ADHAYCLGPA
STRPYLNLGI LEQALRETEA DAAWVGWGFV AEDPAFAELC DRLGVTFIGP SAEAMRKLGD
KIGAKLLAEE VGVPVAPWSR GPVEDLDAAR AAAERIGYPL MLKATAGGGG RGIRVVSSEA
ELVDAYERTR SEAERAFGSG VVFLERLVTG ARHVEVQVIA DGQGTAWALG VRDCSVQRRN
QKVIEESASP LLTPEQTEEL KASAERLALA VGYRGAATVE FLYQPAEKLF AFLEVNTRLQ
VEHPITEATT GMDLVKAQLH VAAGGTLDGQ RPREIGHAVE ARLNAEDPDR DFAPAPGRIS
LLNFPSGPGI RVDTGVSEGD TIPADFDSMI AKIIAYGRDR DEALARLRRA VADTDVLIEG
GSTNKSFLLD LLDAPEVIDG SADTGWIDRM RAQGRLQATR HSGVALAVAA IDAYTEAEQA
EQQHLLSTAR GGRPQVRHTG SRAVELKLRG TSYRITVART APQRFRVEIE DGPTAHTVDV
EIERHGTATG QLLVHGRRYR FVTGTHGPVH VVEIDGTVHR ISRDEGGIVR SPAPALVVAA
PVDVGSEVEA GAPVLVLESM KMETVLRAPF RAVLRERPVS VGSQVEAGAP LLRLEPLDTD
EVDADAGGQR EDLGIPPRVE AVDAEQRAER ARAELRSRLL GYDLDLDDEA RALDDYLAAR
AELVEAGRRP VKAEGELLRV FADLSELSRN KPVDGEGSAS TRLHSPHEYF HTYLQSLDVD
RAGLSEVFQQ RLTRALAHYG VTDLEQGPEL TEAVFRLFCV HQRAGGDIGV VTALLRQWLA
EPAPEQSVRE TIGHVLEHVV VATQVRFPVV ADLARSVVFR WFAQPMLRRR RAELYANVRR
HLRYLDAHPD AADRSERIAE MVSCSEPLVR VLGQRIHRQG ADLGPLLEVI LRRYYRDRSL
ANVQVRRVAD FSCVTADYEL DSERVRVVST AADPQRVVDA LHAVSEAADD ATDTGLVVDL
YLSWSDEFAD DDTAAAKLLA TLTEVSLPDS VRRVTTTVAG RSGSVMHHHY TFRASASGLV
EDRLIRGLHP LVAQRLQLRR FSEFDLTRLP SADEEVYLMR CVAPDNPSDE RFVALAQVRD
LTPLRDSQGR LVALPAVEGT LAACLDAIRA QQVRRPVKKR LDTNRVVIYV WPPIELTTEE
LRAVANRVVP TTTGAGVEEV EFLGRRRDPE TGATRDVAVL ITHNPGSGVS VRMTTPSTEV
IRPLDAYGQK VLRARRRNTV YPYELVELVA GKNGTFVEYD LDDEGELVPV DRPKGGNTAG
IVVGVVTTPT KLYPEGVTRV VLLGDPTKSL GALAEPECAR VIAALDLAER MRVPVEWFAL
SAGARIAMDS GTENMDWVAA ALKRIVHFTQ DGGEINVVVA GINVGAQPYW NAEATMLMHT
KGILVMTPDS AMVLTGKQSL DFSGGVSAED NFGIGGYDRV MGPNGQAQYW APNLAGACDV
LLSHYEHTYV VPGERGPRRA ETTDPRDRDV RDYPHNVVDS EFTTVGEIFS AEKNPDRKKP
FDIRTVMRAV ADADHPVLER WAGMADAETA VVQDARLGGW PVCLVGIESR SVPRRGFPPT
DGPDTYTAGT LFPRSSKKVA RAINAASGNR PLVVLANLSG FDGSPESMRK LQLEYGAEIG
RAIVNFEGPI VFCVISRYHG GAFVVFSKAL NPNMTVLAVE GSFASVLGGA PAAAVVFSGE
VDARTAADER VRKLEERLTR ADDEERAELA TRLAEVKASV RAEKLGEVAA EFDNVHSIQR
AVEVGSVDAV IPPESLRPEL IAAVERGLRR
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