| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22860 |
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| Symbol | |
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| ID | 8387610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2457996 |
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| End bp | 2459627 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976339 |
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| Product | histidine kinase with GAF domain protein |
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| Protein accession | YP_003134121 |
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| Protein GI | 257056289 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.854581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.459297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGAGC CCGCGAGCGG GCGACCGGAC GATATTCGAC TCAAGGCCCA CGCCGCCCTC
GCCGGCCTGC GTCTCGACGG GGCGTGGTAC GAGATGCGGG AACGTATCGA CGAGAGCGCC
GGGATGCGTG ACCGTTTCGA GGAGCTGTTG GACGCCGTGT TGGCGGTGTC CTCGGAACTC
GAACTGGATC CGACGCTGCA GCGGATCGTC CGGGCCGCCA CCGAACTCGT CGACGCGCGG
TACGGGGAGT TGGAGATATC GGGCGATGAC GAGGGCGGTC CCGTTGAGTT CGGCTACGTC
GGAACCGACG AGGCCCGGGC GGGGTCGGCG CGCGCGTTCC GGGAGCACCG GCCGGGACAC
GGTCTCCTCG ACGTCCCCGT ACGAGTGCGG GGCACCGTCC TCGGCGAGCT CCGTCTCTTC
GAGAAGCGGG ACGGTGCCGG ATTCACCGAG GACGACGAGG TGATGTTGCA CGCGTTGGCC
GCCGCGGCCG GGGTGGCGAT CGACAACGCG CGGTTGTTCG AACAGTTCCG CATGCGGGAA
CGGTGGCTCG GCGCGGTGGC CGAGATCAAC GGTGAGTTGC TTGGCGGTGC CTCCGTGGCG
GATACGCTCG ATTTGGTCGT GCGCAGGGCC TGCGAGTTGC TCGAGGCCGA GGCCGCGTGC
ATCCTGCTGC CTTCCGACAA GACCGCCGAG GCCCTGGCGG TCACGGCGTC GGCCGGAGGG
CGACGTGATC GCCTCGCCAC ACTGACCGTC GAGCTCGGGG AGGACTCGGC CTTCTCGACA
ACCGTGCGGC AGCAGCGGCC CCGGCTGTTT CCCGAGCTGT CCCTTGCGCT GCCCGCCGTG
GCCTCCGCCG GATTCGGCCC CGCAGCGGTC GCGCCCCTGA CTCATACGAC GAGCACCGAA
GGAGCGCTTC TCGTCGCCCG GGCCACGGGC GCGGCCGCGT TCACCGCCGA GCGGTTGCCG
ATGCTGACAT CGTTGGCCGA TCAGGCGGCC GTCGCGCTGG GGTTCGCCGA GGAACAACAC
AACCAGCGGT TGGCCGAACT GTTCGACGAA CGTGACCGCA TCGCCCAGGG ATTGCACGAC
CACGTCATCC GGCGCCTCTT CGCCATCGCC ATGCACTTGC AGGGCACCCT GCGTCGTATC
GACGACCGGA ACGTGCGGTC CCGGGTGGAA CACGTGGTCG ACCAGCTCGA CGCCACCGTG
CGGGAGATCC GTACCTCCGT GTTCGATCTG CACACGACCG ATACCCAGGG CGAGCGAAGC
CTGCGGCGGC GGCTGCTCGA CATCGTGGAG GAGTTGACCG CCGACTCCGG TCCGACGCCC
ACCGTGCGGC TGTCGGGACC GCTCGACACG CACGTGCCTT CCCGGGTGGG GGAGCACGCG
GAGGCCGTGC TGCGTGAGGC GCTGAGCAAC GCACTACGCC ACTCCGGTAG CCGGGCGATC
CGCATCGCGG TGGAAGTCGA CCGGGGTCGA CTGTCGGTCG ACGTGGCCGA CGACGGGGTG
GGGATGCCGA AGAACGTGCG ACGAAGCGGC TTGGAGAACC TGGCGAGACG AGCGCGGCAA
TGTGGCGGGG AGTTCATCGT CGCGGACGAA CCCGGTGGGG GTACTCACGT GACGTGGCGC
GTACCGCTGT GA
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| Protein sequence | MEEPASGRPD DIRLKAHAAL AGLRLDGAWY EMRERIDESA GMRDRFEELL DAVLAVSSEL
ELDPTLQRIV RAATELVDAR YGELEISGDD EGGPVEFGYV GTDEARAGSA RAFREHRPGH
GLLDVPVRVR GTVLGELRLF EKRDGAGFTE DDEVMLHALA AAAGVAIDNA RLFEQFRMRE
RWLGAVAEIN GELLGGASVA DTLDLVVRRA CELLEAEAAC ILLPSDKTAE ALAVTASAGG
RRDRLATLTV ELGEDSAFST TVRQQRPRLF PELSLALPAV ASAGFGPAAV APLTHTTSTE
GALLVARATG AAAFTAERLP MLTSLADQAA VALGFAEEQH NQRLAELFDE RDRIAQGLHD
HVIRRLFAIA MHLQGTLRRI DDRNVRSRVE HVVDQLDATV REIRTSVFDL HTTDTQGERS
LRRRLLDIVE ELTADSGPTP TVRLSGPLDT HVPSRVGEHA EAVLREALSN ALRHSGSRAI
RIAVEVDRGR LSVDVADDGV GMPKNVRRSG LENLARRARQ CGGEFIVADE PGGGTHVTWR
VPL
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