Gene Svir_22800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22800 
Symbol 
ID8387604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2452576 
End bp2453763 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID644976333 
Productflavodoxin reductase family protein 
Protein accessionYP_003134115 
Protein GI257056283 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.401213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCC CGAAGTCGGC CGAGATCGTC CGTGCCACCT TGCCCGCGGT GGGCGGAGCG 
ATCGGTGAGA TCGCCGAGGT CTTCTACCGC AAGATGTTCA CCGCCCACCC GGAGCTGCTG
CGCGACCTGT TCAACCGGGG TAGTCAGGCC GTCGGTGAGC AACAACAGGC CCTGGCGGGA
TCCATCGCGG CGTTCGCCAC GACGCTGGTG GAACAGCCGG ACACCCTTCC GGAGACGATG
CTCGACCGCA TCGCGAACAA ACACGCCTCG CTCGGGGTGA CCCGGGACCA GTACCGGATC
GTGCACACCC ACCTCTTCGC GGCGATCGCG GAGGTTCTGG GCGATGCGGT GACCGAGGAG
GTCGCCGCGG CGTGGGACGA GGTGTACTGG TTGATGGCCG ACACCCTCAT CGCCCGGGAG
GAGCGGCTCT ACGCCGACGC CGGAGTGGCG CCCGGTGCTG TCTGGCGGGA GTACCGCGTC
GTGGGCCGCT ATCCGGAAAC CGACAACACC GCGACCTTCC TCCTCGCACC GGCCGACGGC
TCGGCCGTGC CTGATTTCCG TCCCGGACAG TACGTTTCCG TACAGGTCGA ACTGCCCGAC
GGCGCACATC AGATCCGGCA GTACAGCATC TCCGGCACCT CGGTCGACGC GTTGGCGATC
ACGGTGAAGC GAGTGACCGA ACCGGTCGTG GGCGAGGTCT CCCACCATCT GCACGACCGC
ATCGCCGAAG GCGACACCGT ACGGGTGAGT CTGCCGTTCG GTGATGTCAC GCTCGACGAG
GCGGGCAATC CGCTCCTGCT GATCTCGGCG GGCATCGGCA ACACCCCGCT GATCGGTATG
CTCGGCCACC TAGCCGAGAC CGGATCGACG AGACAGGTCG TCGTGGTGCA CGGCGATCGC
AGTCAACGCA CGCACGCACT GCGATCCGAG CTGGAGCGGT TCGCGGCGAA ACTGCCCAAC
GCCACGGTCC ACGTCTGGTA CGAACACCCG GAGGGGACCT GGCCCGCCGA CCGCACCGGG
CAGGTCGACC TCACCGCCCT CACCGTTCCG CAGGACGCCA CCGTCTACCT CTGCGGCCCT
CTCCCCTTCA TGCGGAAGAT GCGGACACAA CTACGGCAGC TCGGTGTCCC CGCGGCCAAC
ATCCACTACG AGGTGTTCGG CTCCGACATG TGGCTCGCTC GGGACTGA
 
Protein sequence
MLSPKSAEIV RATLPAVGGA IGEIAEVFYR KMFTAHPELL RDLFNRGSQA VGEQQQALAG 
SIAAFATTLV EQPDTLPETM LDRIANKHAS LGVTRDQYRI VHTHLFAAIA EVLGDAVTEE
VAAAWDEVYW LMADTLIARE ERLYADAGVA PGAVWREYRV VGRYPETDNT ATFLLAPADG
SAVPDFRPGQ YVSVQVELPD GAHQIRQYSI SGTSVDALAI TVKRVTEPVV GEVSHHLHDR
IAEGDTVRVS LPFGDVTLDE AGNPLLLISA GIGNTPLIGM LGHLAETGST RQVVVVHGDR
SQRTHALRSE LERFAAKLPN ATVHVWYEHP EGTWPADRTG QVDLTALTVP QDATVYLCGP
LPFMRKMRTQ LRQLGVPAAN IHYEVFGSDM WLARD