Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22730 |
Symbol | |
ID | 8387597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2446096 |
End bp | 2446746 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976326 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003134108 |
Protein GI | 257056276 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTGA GGCCGGCCCG AAGTGGTAGA TCAGACGCCA CGCGCCGGCG CATCCTGGAA ACCGCTGAAC GACTGTTCGC CGAAAACGGT GTGGCCTCGG TGTCCAATCG GCAGATCAGC GAGGCCGCCG GTCAGGGGAA CAACACCGCC GTCGGCTACC ACTTCGGGAC CAAAGTAGAC CTCATCCGAG CCATCGTGCG TCGGCACGCC GAGAGCATCG AGCGACGTCG GTTGGAGATG GTGGAACGAG CCGCGTCCTC GTCCCATCCC CGCGACTGGA TCCTGTGCCT GATACGTCCG TTGGCCGACC ATCTGGACTC CTTGGGGAAT CCCACGTGGT TCGCACGTTT CAGCGCGCAG GTCATGACCG ATCCGACACT GCGCGAGATC CTCTACGAGG ACGCACTGGC CTCACCCTCC CTGCTGCGCA CGCTCGACGG CCTGCAGCAG TGTCTGCCCG AACTCCCGGT CGAGGTGCGG CTGGAGCGCA GTGACATGAC ACGCCAGCTG ATGGTGCACA TGTTCGCCGA ACGGGAACGT GCGCTCGCGG AACTGTCCAC CACCCCGCGG TCGAGCTGGC GTGCTGCGGC GGAGGGGTTG GCCGACGCCA TCGTGGGGCT GTGGCTGGCG CCCGTCACGA CACGGCCGTG A
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Protein sequence | MSVRPARSGR SDATRRRILE TAERLFAENG VASVSNRQIS EAAGQGNNTA VGYHFGTKVD LIRAIVRRHA ESIERRRLEM VERAASSSHP RDWILCLIRP LADHLDSLGN PTWFARFSAQ VMTDPTLREI LYEDALASPS LLRTLDGLQQ CLPELPVEVR LERSDMTRQL MVHMFAERER ALAELSTTPR SSWRAAAEGL ADAIVGLWLA PVTTRP
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