Gene Svir_22710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22710 
Symbol 
ID8387595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2443545 
End bp2444582 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID644976324 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003134106 
Protein GI257056274 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTC CTTCCCGCCA CGGCCGCCGG CTCGTCCTCG CCGCGCTCGC CGTACTCATC 
CTGCTGCTGA CCGGCTGTTC CGGTGGCGGG GAGTCCCCCA GCGCCGAGGA CACCCGGGCG
GTGGAGACGG AACCCGATGC TCTGCCGGTG ACCATCGAGC ACCGATTCGG CTCCACGACC
ATCACCGACC CTCCGCGGCG GGTGGTCAGT GTGGGACTCA CCGACCACGA CGCCTTGCTG
GCCCTCGGCG TGACCCCGGT CGCGACCACC CGGTGGTTCG GCGACTATCC CGGCGCGATC
GGCCCCTGGG CGCGGGAAGC GCTCGGCGAC GCGCCGGACC CGGTGGTACT CCACAACCAG
AACGGCATCC AATTCGAACG CATCGCGGAA CTGGAACCGG ATCTCATCCT CGGCCTGTAC
TCGGAGCTGA GTCAGGCCGA CTACGACATC CTGTCCCGGA TCGCGCCGAC GATCGCGCCT
CCGCCGGGCC AGCCGGACTA CGGCATCTCG TGGCGGGAAC TCACGACGAC GGTGGGCAAG
GCCATCGGCA AACCCGCCCA GGCGCAGCGG GTCGTCGCCG ACGTCGATCG CACACTCGAG
CGGCTCCGCG ACGAGCACCC CGAATTCGAG GGCGCCACCG CCTTGGTCGC CACCCTGTAC
GAGGGCTACT TCCTGTACGG CGACGACGAT CCTCGTTCAC AGCTGCTGAC CGATCTCGGT
TTCACTCTCC CGCAGGAGCT CGACGACCTG GTCGGCGATC AGTTCGGGGC CAGCATCAGC
AAAGAGCATG CCGACGTCCT CGACGCGGAC GTCGTCGTGT GGCTCACCGA CGACGGCGAC
GCGGAACTGC GCGAGGACCC CCTGTACAGC AAGCTTCGTC CGGCCAAGGA GAGGCGCGAG
GTCCTGGTCG AGGAGAACAG CGACTTCGGC GCCGCGTTCT CCCAGGTGTC GGCGCTCAGT
GTGCCGTACG TCCTCGAACA CCTCGTGCCA CGACTCCAAG CCGCCGTGGA CGGCGATCCC
TCGACCGTCG CCGACTGA
 
Protein sequence
MSVPSRHGRR LVLAALAVLI LLLTGCSGGG ESPSAEDTRA VETEPDALPV TIEHRFGSTT 
ITDPPRRVVS VGLTDHDALL ALGVTPVATT RWFGDYPGAI GPWAREALGD APDPVVLHNQ
NGIQFERIAE LEPDLILGLY SELSQADYDI LSRIAPTIAP PPGQPDYGIS WRELTTTVGK
AIGKPAQAQR VVADVDRTLE RLRDEHPEFE GATALVATLY EGYFLYGDDD PRSQLLTDLG
FTLPQELDDL VGDQFGASIS KEHADVLDAD VVVWLTDDGD AELREDPLYS KLRPAKERRE
VLVEENSDFG AAFSQVSALS VPYVLEHLVP RLQAAVDGDP STVAD