| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22480 |
|---|
| Symbol | |
|---|
| ID | 8387572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2420286 |
|---|
| End bp | 2421212 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644976301 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003134083 |
|---|
| Protein GI | 257056251 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.542371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGT CGGTGCATCG GTTGCGCATG CTGCGGGAGC TGCACCGCAG GGGCACCATC
ACGGCCGCCG CGGCGGCACT GCACTACACG GCCTCGGCCG TTTCCCAGCA ACTTGCACAG
TTGGAACGGG ACGTCGGTGC CAAGTTGTTC GAACGGCTGG GGCGTCGGGT GCAGCTGACC
GAATTGGGCA TGCTGCTCAC CGAGCACGCC GAGGAGATCC TGGGCGCGGT CGAACGCGCG
ACCGTGGCGC TGGAGGAAGC GCAAGAGACG CAGACCGTGC GGTTGACGGC CGGGGTGTGG
GCGTCGGTGG CCTCGGGCCT GCTGCCCACC GCGCTCGCCG CGCTCGCCGA GAAACACCCC
GGAATCGAGG TACGCACGCG CGAACTGGCT CCCGAGGAGA CCCCTGACGC GGTTCGGGAC
GGATCGCTGG ATTTCTCGTT CGTCATCGAC TACACCGACG CGCCGACGCC ATGGGACAAC
GGCCTGGAAC GCGTGGCGGT CGCGGTGGAA CGCCTGCACG CCGCCCTGCC CGCGGCGACC
GCGCCCGGCA GCACGGTGAG TCTGTCCGAT CTGGCTGACC AGCCGTGGAT CCTCGCCAGC
CCTCGAAGCC ACTTCGGCAG GGCGGTGCGA GTGGCCTGCC GTCGGTTCGG GTTCGAACCG
AAGATCTATC ACGAGGTCGA GGAGCAGGCC ACGGCCATGG CCATGGTGAG TGCGGGGCTG
GGGGTCACGC TCGTCTCCGA TCTGGGATTG ACGTTACGCC CGCCGGGGGT GGACATCGTG
TCGTTGTCGA CACCCGTCAT GCGCACCGTC TCCGTGGCCT ATCGCCGCGC CGCGTTGCGC
AGACCCGCCT TACGGCTGGT GATCGATGCC GTGCGGGCCG CCGCGGCGGA GATCGGACTC
GGGGCCTCGG CGACGGTTCC CGGTTGA
|
|---|
| Protein sequence | MELSVHRLRM LRELHRRGTI TAAAAALHYT ASAVSQQLAQ LERDVGAKLF ERLGRRVQLT
ELGMLLTEHA EEILGAVERA TVALEEAQET QTVRLTAGVW ASVASGLLPT ALAALAEKHP
GIEVRTRELA PEETPDAVRD GSLDFSFVID YTDAPTPWDN GLERVAVAVE RLHAALPAAT
APGSTVSLSD LADQPWILAS PRSHFGRAVR VACRRFGFEP KIYHEVEEQA TAMAMVSAGL
GVTLVSDLGL TLRPPGVDIV SLSTPVMRTV SVAYRRAALR RPALRLVIDA VRAAAAEIGL
GASATVPG
|
|---|
| |