| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22460 |
|---|
| Symbol | |
|---|
| ID | 8387570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2417489 |
|---|
| End bp | 2418895 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644976299 |
|---|
| Product | conserved hypothetical protein TIGR03440 |
|---|
| Protein accession | YP_003134081 |
|---|
| Protein GI | 257056249 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.599861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCG TCCACAATGT CCACAACGTC CGCAGGGACG TCCCCCTTCC CGACGACCGA
AGCGACCTGC CACCCGAAGC GGACCATCCG CTGGTCGACC TACCCGACGA GGAGCTTCGT
GTCCACACGG CCGAGACATT GGAGCGGGCA CGTGACCGCA GCACCACACT GACCGAGGCC
GTGGACGACG ACGACCTGGT CAAACAACAT TCGAAGCTCA TGTCGCCGCT GGTGTGGGAT
CTCGCGCACA TCGGTAGCCA GGAGGAGATC TGGCTGGTCC GCGATGTGGG AGGGCGCGAG
CCGTTGCGCC CGGAGATCGA CGACCTCTAC GACGCCTTCC AACAGCCACG GGCGATTCGA
CCGTCGCTGC CGCTGCTCGG CCCTGCCGAA GCCCGTGACT ACGTAGGACA GGTGCGGCGC
AAGGCGCTCG ACGTGTTGGA GCAGACACCC CTGCGGGACG GGGACCTCAC TCGCCTGGCC
TTCGCGTTCG GCATGATCGC CCAGCACGAG CAACAACACG ACGAGACCAT GCTGGCGACC
CACCAACTGC GTAGAGGCGA CCCCGTGTTG CACGCCCCGG CACCGCCGCC CGCGTCGGCG
CTCGACCTCC CCGAGGAAGT CGTCGTCCCG GCCGGCCCCT TCCTCATGGG CACATCGGTG
GAGCCGTGGG CGTTGGACAA CGAATGCCCG GCCCACGAGG TGTACGTGGA CGCCTTCGCC
GTGGACACCA CACCGGTCAC CAACGCGCGG TACGCGGAGT TCGTGGAGGA CGGCGGATAC
CACGACCGGC GTTGGTGGAG CGAGGAAGGC TGGCACTATC GCAGCGTTCA CGACATCAAC
GCGCCGCGTT TCTGGTGGCG GGAGGACGGC CACTGGTGGC GTACGCGGTT CGGGGTCCAC
GAACCGGTCC CGGACGACGA ACCGGTGGTA CACGTCTCCT ACTACGAAGC CGAGGCGTTC
GCGGCGTGGG CGGGCCGTCG ACTGCCCACC GAGGCGGAGT GGGAGAAGGC GGCCCGGTAC
GATCCGGCCA CCGGACGGTC CCGGCGCTAC CCGTGGGGAG ACGAGGATCC CACGCCGCGC
CACGCGAATC TGGGGCAGCG GCATCTTCGG CCCGCTCCCG TGGGCGCCTA TCCGGGGGGT
GCCTCCCCTC TCGGGGTGCA TCAGCTGATC GGTGACGTCT GGGAGTGGAC CAGCAGCGAC
TTCCGGCCGT ACCCGGGTTT CGTGGCCTTC CCGTATCGGG AGTACTCCGA GGTGTTCTTC
GGCCCCGACC ACAAGGTGCT GCGCGGGGGT TCCTTCGGCA GCGACCCGGT GGCCGTCCGG
GGCACGTTCC GCAACTGGGA CTTCCCCGTT CGCAGGCAGA TCTTCGCCGG CTTCCGTTGC
GCCCGCGACG TGACCGCCGG TGTGTAG
|
|---|
| Protein sequence | MASVHNVHNV RRDVPLPDDR SDLPPEADHP LVDLPDEELR VHTAETLERA RDRSTTLTEA
VDDDDLVKQH SKLMSPLVWD LAHIGSQEEI WLVRDVGGRE PLRPEIDDLY DAFQQPRAIR
PSLPLLGPAE ARDYVGQVRR KALDVLEQTP LRDGDLTRLA FAFGMIAQHE QQHDETMLAT
HQLRRGDPVL HAPAPPPASA LDLPEEVVVP AGPFLMGTSV EPWALDNECP AHEVYVDAFA
VDTTPVTNAR YAEFVEDGGY HDRRWWSEEG WHYRSVHDIN APRFWWREDG HWWRTRFGVH
EPVPDDEPVV HVSYYEAEAF AAWAGRRLPT EAEWEKAARY DPATGRSRRY PWGDEDPTPR
HANLGQRHLR PAPVGAYPGG ASPLGVHQLI GDVWEWTSSD FRPYPGFVAF PYREYSEVFF
GPDHKVLRGG SFGSDPVAVR GTFRNWDFPV RRQIFAGFRC ARDVTAGV
|
|---|
| |