| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22200 |
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| Symbol | |
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| ID | 8387544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2388650 |
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| End bp | 2389303 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976273 |
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| Product | haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED |
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| Protein accession | YP_003134055 |
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| Protein GI | 257056223 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.172111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTCTGGG ACATGGACGG CACGCTCGTC GATTCGGAGA AGCTCTGGGA CATCGCGCTC
CACGGCGCGG CGGAGTGGTT GGGGGGTGCG TTGACACCGC AGCAACGCGC CACGCTCGTG
GGAGCGAACA TGACCGTCAC GTCCCGGTAC TTGTTGGAGG TGACCGGCCA TCCCGTCGCC
GAGCAGGCTG TGACCGAGGT CGCCGATTGG ATCCGCGCTC GCATCAAAAC GCTGTTCGCC
GACGAATTGC CCTGGCGGGA GGGCGCTCGT GACGCGCTCG TGGCGGTGCG CGCGGCCGGT
ATCCCGTCCG CGCTGGTCAC CTCCACCGAG CGGCCGCTGA CCGAGCTCGC TCTCCGCACC
ATCGGAGCCG AGTTGTTCGA CGCCACCGTT TGCGGCGACG AGGTGGACGG ACTCAACAAG
CCCCATCCCG AGCCCTACTT GCGGGCCGCG CGCCTCCTCG GCGTCGACCC GACACGGTGC
GTGGCTGTGG AGGACTCCCC GGTGGGCGCG GAATCCGCCG CGGCCGCAGG CTGCACGGTG
CTCGTCGTGC CCAACGAGGT GGCCGTGCCG CCCGGGCCGC GTAGGGTGTT CCGCTCCTCA
CTCGTCGGCG TCGACGCGAC GGTGCTGGCC GACATGCTTC GCACCTCGCG CTGA
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| Protein sequence | MFWDMDGTLV DSEKLWDIAL HGAAEWLGGA LTPQQRATLV GANMTVTSRY LLEVTGHPVA
EQAVTEVADW IRARIKTLFA DELPWREGAR DALVAVRAAG IPSALVTSTE RPLTELALRT
IGAELFDATV CGDEVDGLNK PHPEPYLRAA RLLGVDPTRC VAVEDSPVGA ESAAAAGCTV
LVVPNEVAVP PGPRRVFRSS LVGVDATVLA DMLRTSR
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