| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22000 |
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| Symbol | |
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| ID | 8387524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2369164 |
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| End bp | 2370606 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644976253 |
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| Product | sphingosine/diacylglycerol kinase-like enzyme |
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| Protein accession | YP_003134035 |
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| Protein GI | 257056203 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00559373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTACA GCGCGGCACT CCCCCACACC CCTGCCGACA TCGCACTCGT CCGCCTCAGC
CGTTGGGCGG ACAAGGGGCG ACTGTGGTGG TTCGTCGCCG CCCTCCTGGC CATCCGCAAG
GGCCCGTCCC GCAGGGCGGC TCTCCGCGGA TTGGCCGCCC TCGGCATCGC CAGTGCCGTC
GCCAACCTCG TCGGCAAACC CCTCCTACCC CGCCGCAGGC CCGCCGCCGA GGCCGTCCCC
GAGGTTCGCC GCCTCCGCAT CCACCCCACG TCGTCGTCCT TCCCGTCCGG ACACGCCGCT
TCCGCCGCCG CGTTCGTCAC CGCCGCGGCT CTCGAATCCC CCCGCCTCGG AGCCGCGCTC
ATTCCGCTCG GCACGGCCGT CGCCTACTCC CGGCTGCACA CCGGTGTGCA CTGGCCCAGC
GACATCGGCG CCGGAGCCGC CCTGGGCGCC TTCACCGCGT TGGCCACCCG CCACTGGTGG
CCTCCGCACC CCGACGCCCG GGCGCACACC ACCCACCCCG CCGACGCACC GGCACTTCCT
GAAGGAGAAC GTGTCCTCAC CGTCGTCAAC CGCAGCTCCG GCACCGCTTC CGACGACCCC
ACCCCCACCA TCCGCGCCCG CTGGCCCCGC ACCGAACTGC TCCACACCGA GCCCGGCACC
GAGCTACGGC TCCAACTCAC CGAGGAACTC CGCCACCACG GTGGACGCAT CCGCGCGCTC
GGCGCCGCGG GCGGGGACGG CACGGTCGCG GCCGTCGCCG CCGTCGCCGC CGACCACGGC
CTGCCCCTGG CCCTCATCCC CACGGGAACC CTCAACCACT TCGCTCGGGA CCTCGGCATC
CGCGACCTCG CCGACACCGA CGTCGCGATC CGTGCCGGTA GCGCCGTGGG CATCGACCTC
GGCGAGGTCG AGGTCGACAC CGACCACGAC ACCGTCCGCC GCCAGTTCAT CAACACCGCC
AGCCTCGGCG GCTACCCCGA GATGGTGCGA CTCCGCGAAA CCATCGAACG CCACCACCCC
AGATGGCCCT CGGCCATCGT GGCCATGGCC CGCACCCTCC GTCACGCCCG GCCCCTACGC
ATCCGGTTGA ACGGCGAGGA CATGCTCGTG TGGCTGCTGT TCGTCGGTAA CGGCACCTAT
GCCCCCAAAG GGGTCATCCC CTCACATCGG CCCGCGCTGG ACACCGGCCT GCTCGACGTG
CGCTACCTCC GCGCCGACAA ACGCTACTCC CGGACCCGCT TCCTGCTCGC CGTCGTCACC
AACACCCTCG CGACCAGTCA CGTCTACGCC CAACGCGACC TCGCCGAGGT CGACGTGGTC
CTTCTCGACG GCAACCGTCG CATCGCCACC GACGGGGAGG TCGGGCCGCT GGGGCATCGT
TTCCGCTTCC GCAGCCGTCC CAGCGCGCTG AGCGTCTACC GGCCACGCAC CCCCACACCG
TGA
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| Protein sequence | MRYSAALPHT PADIALVRLS RWADKGRLWW FVAALLAIRK GPSRRAALRG LAALGIASAV
ANLVGKPLLP RRRPAAEAVP EVRRLRIHPT SSSFPSGHAA SAAAFVTAAA LESPRLGAAL
IPLGTAVAYS RLHTGVHWPS DIGAGAALGA FTALATRHWW PPHPDARAHT THPADAPALP
EGERVLTVVN RSSGTASDDP TPTIRARWPR TELLHTEPGT ELRLQLTEEL RHHGGRIRAL
GAAGGDGTVA AVAAVAADHG LPLALIPTGT LNHFARDLGI RDLADTDVAI RAGSAVGIDL
GEVEVDTDHD TVRRQFINTA SLGGYPEMVR LRETIERHHP RWPSAIVAMA RTLRHARPLR
IRLNGEDMLV WLLFVGNGTY APKGVIPSHR PALDTGLLDV RYLRADKRYS RTRFLLAVVT
NTLATSHVYA QRDLAEVDVV LLDGNRRIAT DGEVGPLGHR FRFRSRPSAL SVYRPRTPTP
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