Gene Svir_21730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21730 
Symbol 
ID8387497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2339127 
End bp2339456 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID644976226 
Producthypothetical protein, contains double-stranded beta-helix domain protein 
Protein accessionYP_003134008 
Protein GI257056176 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.769467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAT TCTCGTTGGA GGCACTCGCC AGGAACCACT TGGAGCGTGC GGCCGAGGCC 
AACGCGGGTC GGAGCGCGAG CACCGTCTAC GGAGGCCACG AACACGTCCT TCGACAGACG
GTCATCGCGT TGACCGCCGG AGCCACCTTG ACCGAACACG AGAATCCCGG TGAGGCGACG
TTGATCGTGC TGCGCGGACG CGTGCGGCTG CGCTCCGGAG AGGACGAGTG GGACGGGCGG
ACGGGCGATC TCATCGTGAT ACCCCAGGCC CGCCACAGCC TCGAGGCGTT GGAGGACAGC
GCCGTCGTCC TCACGGTCGC GAAGAGGTAA
 
Protein sequence
MQKFSLEALA RNHLERAAEA NAGRSASTVY GGHEHVLRQT VIALTAGATL TEHENPGEAT 
LIVLRGRVRL RSGEDEWDGR TGDLIVIPQA RHSLEALEDS AVVLTVAKR