Gene Svir_21450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21450 
Symbol 
ID8387469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2309054 
End bp2309815 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID644976202 
Productuncharacterized protein involved in cysteine biosynthesis 
Protein accessionYP_003133984 
Protein GI257056152 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.412828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGACT TCTTCACAGG TGTCCGACTG TTCGGACGTG GACTGGGTAT TCTGCTTCGC 
TCGCCGAGGC TGTTGCTCAT CGGCATGCTG CCGGCGGCGC TGACCACAGT GCTGTTGGCA
GGCGGAATGA TCGCCCTGGT CTACTGGATC GGCGACCTCA CGGCACTGAT CACGCCGTTC
GCGGACGAGT GGGCGGAAGT CTGGCGCATC GCGATGCGAG TGGCGGCCGG TGTCGCGCTG
GTCGGGGTGG CGCTGGTGCT TGGCCTCACC GGCTTCACGG CATTGGCGCT GGCCATAGGC
GGCCCGTTCT ACGAACACAT CGCGGAGAAG GTGGAAGACG ACCTCGGCGG CCCTCCCAGC
GGGGAGGACC TGTCGTGGTG GTGGCTGCTG TGGGTGGGAC TTCGGGACGG CGTTGTGCTC
ATGCTGCGAT CGCTGTTGTT CACGCTCCCT TTGTCCGTCG CGGGATTCAT CCCCGTGGTC
GGACAGACCG TCGTGCCGGT GCTCATGGCG TTGGTGACCG CGTGGTTCTT CGCGCTGGAA
CTGGTGGCGG TGTCGTTCTA CCGGCGTGGA ATGGACCTCA AGCAGCGGCG CGAGCTGTTG
GGTGAACGAC GCTCTCTCGC GTTGGGATTG GGGCTGCCCG CGTCCCTGCT GTGCGCGGTT
CCGCTACTGG CCATCGTCGT CATGCCGGTC GCTTTCGTCG GCGGTGTGCT CGTCTCTGCC
GAGGTCCTCC GCAGTACCGA CACCGCTGCC GTGGGCTCCT AG
 
Protein sequence
MRDFFTGVRL FGRGLGILLR SPRLLLIGML PAALTTVLLA GGMIALVYWI GDLTALITPF 
ADEWAEVWRI AMRVAAGVAL VGVALVLGLT GFTALALAIG GPFYEHIAEK VEDDLGGPPS
GEDLSWWWLL WVGLRDGVVL MLRSLLFTLP LSVAGFIPVV GQTVVPVLMA LVTAWFFALE
LVAVSFYRRG MDLKQRRELL GERRSLALGL GLPASLLCAV PLLAIVVMPV AFVGGVLVSA
EVLRSTDTAA VGS