Gene Svir_21300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21300 
Symbol 
ID8387454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2291213 
End bp2291806 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content69% 
IMG OID644976188 
Producthypothetical protein 
Protein accessionYP_003133970 
Protein GI257056138 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.380414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCCCTCTCGT ACCCACGCTG GTCCCCGCGC GTGGGAAAGT CGCTGAGCTC 
GCGATCGTCG CCAGTGGTGT CGCTCTGATC GCCGTCGCCG CGCAGGTTGC GATCCCCCTT
CCGTTCACCC CGGTCCCGCT CACCGGGCAG ACCTTCGCGG TGCTGTTGGT GGGTGCTTCC
TTCGGGGCGC TGCGCGGCGC TGTGACCCTC CTGGCGTATC TGGCGGTCGG GTTCGCCGGA
CTGCCGGTTT TCGCCGAGGG GAACTCCGGG CTTGGCATCC TCACGGCGCC GAGCGCGGGA
TACCTCCTCG GTATGGTGGC GGCGGCCGTG CTCGTGGGTA GGGCGTCGGA GCGTGGCTGG
GATCGCTCCC TGCCCCGTGC GGCTCTGACG ATGATCGCCG GCAACCTGGT GATCTACGCG
TTCGGGCTGA CCTGGCTCGG GGTCTCGCTC GGCGCAGGTG TGGCCGAAAC GCTGATGATG
GGCGTGGTGC CGTTCCTGAT CGGTGACGCC ATCAAGATCG CCCTGGCGAC CGGGACCCTG
CCCAGCGCGT GGTGGGCCGT GAGGAAGATC AAGGGCCTGC CCGAGCGGGG GTGA
 
Protein sequence
MTSIPLVPTL VPARGKVAEL AIVASGVALI AVAAQVAIPL PFTPVPLTGQ TFAVLLVGAS 
FGALRGAVTL LAYLAVGFAG LPVFAEGNSG LGILTAPSAG YLLGMVAAAV LVGRASERGW
DRSLPRAALT MIAGNLVIYA FGLTWLGVSL GAGVAETLMM GVVPFLIGDA IKIALATGTL
PSAWWAVRKI KGLPERG