| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21220 |
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| Symbol | |
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| ID | 8387446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2281794 |
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| End bp | 2282357 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644976180 |
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| Product | peroxiredoxin |
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| Protein accession | YP_003133962 |
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| Protein GI | 257056130 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00898795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.214618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGA TCAATACGGA AGTGAAGCCG TTCACGACCA CTGCGTTCCA CAATGGTTCG
TTCGTGGAGG TCAGCGACAA GGACCTTCGC GGCAAGTGGT CGATCGTGTT CTTCTACCCG
GCTGACTTCA CCTTCGTGTG CCCGACCGAG CTGGGGGATC TTGCGGACCT CTACGACGAG
TTCACCCGGA TCGGCGTGGA GATCTACTCG GTGTCGACCG ACACGCACTT CACCCACAAG
GCGTGGCACG AGACCTCGGA CACCATCCGC AAGATCCGGT TCCCGATGCT CGGTGACCCC
GCGGGTGTGA TCACGCGGAA CTTCGACGTG ATGCGTGAGG GCCAGGGCCT CGCCGACCGT
GCCACGTTCG TCATCGACCC GGACGGTGTG ATCCAGATCA TGGAGATCAC GCCCGAGGGT
GTGGGCCGCA ACGCCACCGA GTTGCTGCGC AAGGTCAAGG CCGCGCAGTA CGTCCGTGAG
CACCCCAACG AGGTCTGCCC GGCCAAGTGG GAAGAGGGCG AAGAGACCCT GGCCCCGTCG
CTGGACCTCG TCGGCAAGAT CTGA
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| Protein sequence | MALINTEVKP FTTTAFHNGS FVEVSDKDLR GKWSIVFFYP ADFTFVCPTE LGDLADLYDE
FTRIGVEIYS VSTDTHFTHK AWHETSDTIR KIRFPMLGDP AGVITRNFDV MREGQGLADR
ATFVIDPDGV IQIMEITPEG VGRNATELLR KVKAAQYVRE HPNEVCPAKW EEGEETLAPS
LDLVGKI
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