Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20940 |
Symbol | |
ID | 8387418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2240083 |
End bp | 2242203 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976152 |
Product | N-methylhydantoinase A/acetone carboxylase, beta subunit |
Protein accession | YP_003133934 |
Protein GI | 257056102 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.796393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0791884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGC AACGTCGCAT CCGCATCGGG ATGGACACCG GAGGAACCTT CACCGACGTC GTCGCCTTCG ACGAACGCAC GGGGGAACTG GTCACCACCA AATCACCCTC CACACCGGAC GATCCGGCCG AGGGTTTCAT GGCGGCCATC GACAAGGTCC TCACCGTGCT GGGATTCGCC GAAGACGACC ACGAAGCCAG AGGCGGCGCG ATCAGCGCGG TCAGCCACGG CACCACGGTG GCCACGAACC AGTTGCTGGA AGGCAAAGTC GGCGATCTGG GTTTCATCAC CAACGAGGGC TACGAGGCGG TCCTCGAGAT CGCCCGACAA AGCGTCCCCG ACGGATACGG GAACTCCTAT TTCTGGGTGA AACCCGACCG GATCGTGCCC CGGGACCTCG TACGGTCCGT GCGCGGCAGG CTGGATTACA CCGGCGCGGA GATCAGGCCC TTCGACGAGG AGCAGGCCCG TGAGGTCGCC CGGTGGTTCA AGGCCAAGGG CATCAACGCC CTCGGGGTCT GCTTCCTGCA CGCCTACGCC AACCCCGCAC ACGAGGAACG CATGCGCGAC ATCATCGCGG AGGAACACCC CGACGCGGTG GTCTCCATCT CCTCCGAGGT GCTGCGCGAA TACCGCGAGT ACGAACGTTC CATGACCACC CTGGTCGACG CGGCGGTGAA ACCGCGGCTC TCGCGGTACA TCAACAACAT CAAGTCGAGG CTGGACGCCT TCGTCGGCTC CGGTCAGGAC ACCGGCGTGC CGCTGTACGT GATGAAGTCG AACGGTGGCG TGCTCAGCGC CGACGAGGTG GTCCATCAGC CGATCACGAC GGTGCTGTCC GGACCTGCGG CGGGCGCGCT CGGCGCAGCG TTGATCGCGA AGACCGCGGG CTTCGACAAG GTGCTCACCT GCGACGGCGG GGGCACGTCG ACGGACGTCT CGGTGGTCGT CGACGGCGAG CCGAGCCTGA CCACCGAAGG AACCGTCGGC GTGTACCCGT GCAAGATCCC GATGATCGAC GTGGTGACCG TCGGAGCGGG TGGCGGATCG GTCGCCTGGC TGTCCCCGGA AGGCAACCTC AAGGTGGGCC CCCGCTCGAT GGGAGCGGAC CCCGGCCCCC TGTGCTACGG CAAGGGCGGC ACCGAGGTCA CGATCACCGA CGCCCACGTG GTCCTCGGCC GCATCCCACC CCACCTGCTC GGCGGGGAGA TCCCCCTCGA CGTCGAGGCC GCCCGCAGAG GGATCGACGC ACTGGCGGGC AAACTGGGTC TTTCCCTGGA ACGATGCGCC ACCGGCGCGC TGGAGATCTC CGCGTGGAAC CAGGCCAACG CACTGCGGCA GATCACGGTC CAGCGGGGCC TGGACGTACG GGACTTCACC TTGACCACGT TCGGCGGTTC GGGGTCGCTG CTGCTGTGCC GGTTGATGGA CATCCTCGGG CTGAGCACCG TCCTCGTCCC GCCCAACCCC GGTAACGTCT CGGCGTTCGG ACTGCTCACC GTGGACGTGA AGAACGACTA CGTCCGCACG AACGTCTGCC TGCACGACGC GCTCACCCCC GAGGCGCTCG CGACGGTGTA CGGCGAACTC ACCGAACAGG CCCGAGCCGC GCTGGTGAAG GAAGGCTTCG CGGAAGAGGA GCACACGTTC GTCCGTGCCG CCGACATCCG GTACTTCGGC CAGGCCTTCG AGGTGCGGGT CCCCGTGCCG GACGGACCGA TCACCCGGGA ACTCATCGAC GAGGTGGCCC GCCGGTTCCA CGCCGAGCAC CGAGCCCTGT ACGGCTACGA CTTCGACGGC GACGACAGTC AACAGGTGGA GTGGGTCAAC CTCCGCGTCG CCGGCATCGG CGAGATCCGA CGCCCCGAGC TGGTCGCCCA CGACATCCCG GCGGACGTCC CGGCCCCGGA GCCTGCGTCC CACCGCCCGG TGTGCTTCGA CGCGGGACAG GGCTATGTGG ACACACCGAT CTACTGGCGT CCCGATCTTT GCCCCGGTCA GGTCCTCCAC GGCCCGGCGA TCGTGGAGGA GTTCGGGGCC ACGGTGCCGT TGCACCCCGG ATTCACCGCC CGCGTCGACG CCTACCTCAA CATCATCGTG ACCCGGAAGG AACAGGAATG A
|
Protein sequence | MSEQRRIRIG MDTGGTFTDV VAFDERTGEL VTTKSPSTPD DPAEGFMAAI DKVLTVLGFA EDDHEARGGA ISAVSHGTTV ATNQLLEGKV GDLGFITNEG YEAVLEIARQ SVPDGYGNSY FWVKPDRIVP RDLVRSVRGR LDYTGAEIRP FDEEQAREVA RWFKAKGINA LGVCFLHAYA NPAHEERMRD IIAEEHPDAV VSISSEVLRE YREYERSMTT LVDAAVKPRL SRYINNIKSR LDAFVGSGQD TGVPLYVMKS NGGVLSADEV VHQPITTVLS GPAAGALGAA LIAKTAGFDK VLTCDGGGTS TDVSVVVDGE PSLTTEGTVG VYPCKIPMID VVTVGAGGGS VAWLSPEGNL KVGPRSMGAD PGPLCYGKGG TEVTITDAHV VLGRIPPHLL GGEIPLDVEA ARRGIDALAG KLGLSLERCA TGALEISAWN QANALRQITV QRGLDVRDFT LTTFGGSGSL LLCRLMDILG LSTVLVPPNP GNVSAFGLLT VDVKNDYVRT NVCLHDALTP EALATVYGEL TEQARAALVK EGFAEEEHTF VRAADIRYFG QAFEVRVPVP DGPITRELID EVARRFHAEH RALYGYDFDG DDSQQVEWVN LRVAGIGEIR RPELVAHDIP ADVPAPEPAS HRPVCFDAGQ GYVDTPIYWR PDLCPGQVLH GPAIVEEFGA TVPLHPGFTA RVDAYLNIIV TRKEQE
|
| |