Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20320 |
Symbol | |
ID | 8387359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2166278 |
End bp | 2167561 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644976094 |
Product | uncharacterized AP superfamily protein |
Protein accession | YP_003133876 |
Protein GI | 257056044 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.291938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACC ACGCCACCGG AGTGAGCCGC CGGCGATTCC TGCGTGTGGC CACGGGTACC TCGGCCGCGG TCGTACTGTC CACTCTGGCC CCGACCGCCT TCGCCGCGGT CCGTCCCCGA GTCCGCGTGT ACGTGCTCGT GGTGGACGGC CTCCGGCCTG ACGAGATCAC CCCGGCGATC ACACCGACGC TGTATCGGCT GCGGGAGGAG GGCACGACGT TCCCGGCGGC GCGGTCGCTG CCGGTGACGG AGACACTGCC CAACCACGCC ATGATGATCA CCGGGATGCG TCCGGATCGG ACCGGTGTCC CGGCGAACTC GGTCTACGAC CCGGACCTCG GCAAGGTGCG CACACTCGAT GCGGCTGAGG ACCTGCGCGC GCCCACGCTG CTGGAACGGC TGCGGGAGAG GGGCCTGATC ACGGCGAGCG TGCTCAGCAA GGAGTACCTG TACGGGATCG TCGGCGAACG GGCCACCGTG CGCTGGGAAC CGTTTCCCGT CATCCCGATC AGCGACCACG CGCCCGATTT CGCCACCGTC ACCGCGCTCA TGGCCACGGT GTCCAAAACC GACCCGGACT TCGTGTTCAC GAACCTCGGG GACGTGGACA GGCTGGGCCA TGCCGACCTG ACGGGCACGA CACTGCGCGC CGCCCGCACC GCCGCGCTCC GGTCCACCGA TACGCAACTG GCCCGATTCG TGGCGTTCCT CAAACGCACA CACCGGTGGG ACACGAGCGT GCTGCTCGTC CTCGCCGACC ATTCGATGGA CTGGTCGATG ACCCACCGCG TGATCTCGTT GACGCCGGTG CTGGAAGCCG ACCCGTTCCT GGCGGGACGG GTGGCGATCG CGCAGAACGG CGGAGCCGAC CTGTTGACCT TCACCGGTGC CGACAGCGAA CGCGTGGACG CCGTCGACCG GATGCGCGAG CTCGTCCGGG GGGTCGACGG CGTGCTGTCG GTGCACACGC CCGACGAACT GCGACTCGGA CCGCGCGCGG GGGACCTCGT CGCGTACTGC CGGGCGGGAT GGCGGTTCAC CGACCCGAAA CCGTGGTCGA ACCCGATCCC GGGCAACCAC GGACACCCGG CCACCGAACC GATCCCGTTC TTCGTCTCGG GAGGCCATCC GGCCGTGCGC ACCCGAAACG CCTCGTCGGC TGCCGCGACC ACGGTCGACG TGGCGCCCAC CGTGGGAGCC CTGTTCGGGC TGTCCGACCC CGAGGGCGGT TACGACGGCG AGATACGACA CGAGGCGTTC GACACCGCCT CCCCGCCGGT GTAG
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Protein sequence | MNDHATGVSR RRFLRVATGT SAAVVLSTLA PTAFAAVRPR VRVYVLVVDG LRPDEITPAI TPTLYRLREE GTTFPAARSL PVTETLPNHA MMITGMRPDR TGVPANSVYD PDLGKVRTLD AAEDLRAPTL LERLRERGLI TASVLSKEYL YGIVGERATV RWEPFPVIPI SDHAPDFATV TALMATVSKT DPDFVFTNLG DVDRLGHADL TGTTLRAART AALRSTDTQL ARFVAFLKRT HRWDTSVLLV LADHSMDWSM THRVISLTPV LEADPFLAGR VAIAQNGGAD LLTFTGADSE RVDAVDRMRE LVRGVDGVLS VHTPDELRLG PRAGDLVAYC RAGWRFTDPK PWSNPIPGNH GHPATEPIPF FVSGGHPAVR TRNASSAAAT TVDVAPTVGA LFGLSDPEGG YDGEIRHEAF DTASPPV
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