Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20080 |
Symbol | |
ID | 8387335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2139992 |
End bp | 2140810 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644976071 |
Product | carbon monoxide dehydrogenase, medium subunit |
Protein accession | YP_003133853 |
Protein GI | 257056021 |
COG category | [C] Energy production and conversion |
COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0549265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0021832 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCCCCG CCGCGTTGCA GTACCGACGG GCGTCCTCGG TGGAGGACGC GCTGGCCATC CTGGCCGAAC ACGGTGACGA GGCGAAGCTG CTGGCAGGTG GGCATTCGCT GTTACCGCTG ATGAAACTGC GCCTGGCCGC GCCCGAGATC GTCGTGGACA TCGCGGGACT GCCCGAACTG TCCTATGTGC GCGACGAAGG GGAGCACATC GCGATCGGCG CGATGACCCG CTACCACGAC CTGGTGGCCG ACCCGGTGCT GGTGGAGCAC GCGCCACTGG TGGCGCACGT CGCGGGCACG ATCGGTGATC CACAGGTGCG GCACCGGGGC ACCATCGGAG GGTCGGTGGC GCACGGGGAC CCCGCGGCCG ACCTGCCCGC CGCGTTGTTG GCCTGTTCCG CCGAGTTCGT GGTGCGCACC CGGCAAGGAC AGCGCACCGT CGCGGCGGAG GAGTTCTTCC TCGGCCCCTT CACCACCGCC CTCGACCCGG ACGAGGTGCT GGTCGAGGTG CGCGTGCCGA AACGGACCGG GGTGGGGTGG GGCTTCGAGA AGTTCACGCG CCGTTCCATC GACTGGGCCA TCGTGGGTGT GGCCGTGTGC GGCCACGCGG TCGCGCTGAT CAACATGGCG GGAACGCCGA TGCGGGCCGA GGCCACCGAG CGGGCGTTGG CCGAGGGTGC GTCGATCAGC GAGGCAGCCC GGCTGGCGGC CGAGGGAACC AGCCCCGCCG ATGAACCGCA CGCCTCCGGC GAGTACCGCC GCCACCTGGC GAGGGTGCTC ACCGAACGTG CGCTGTTGCA AGCGGCTCGA CGCGGATGA
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Protein sequence | MIPAALQYRR ASSVEDALAI LAEHGDEAKL LAGGHSLLPL MKLRLAAPEI VVDIAGLPEL SYVRDEGEHI AIGAMTRYHD LVADPVLVEH APLVAHVAGT IGDPQVRHRG TIGGSVAHGD PAADLPAALL ACSAEFVVRT RQGQRTVAAE EFFLGPFTTA LDPDEVLVEV RVPKRTGVGW GFEKFTRRSI DWAIVGVAVC GHAVALINMA GTPMRAEATE RALAEGASIS EAARLAAEGT SPADEPHASG EYRRHLARVL TERALLQAAR RG
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