Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20020 |
Symbol | |
ID | 8387329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2135470 |
End bp | 2136525 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976065 |
Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
Protein accession | YP_003133847 |
Protein GI | 257056015 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00294478 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCGACGT TCGTGCGACT AGGACTGAAT CTGGGCTACT GGGGCGCTGG CAACGACGCG TCCAATCTGG CGCTGGCCAA GGAGGCCGAC ACACTCGGTT ACTCGGTGGT GTGGGTCGCG GAGGCGTACG GTTCCGACGC GCCGACGGTG TTGGCGTGGA TCGCGGCCCA GACGTCGTCG ATCGACATCG GCAGTGCGGT CCTGCAGATC CCGGCGCGCA CTCCCGCGGC GACGGCGATG ACCGCCGCCA CCTTGGACAC GCTCTCCGGG GGACGGTTCC GGCTCGGACT CGGCGTCTCG GGGCCGCAGG TGTCGGAGGG GTGGCACGGC GTCCGGTTCA CCGCACCACT GGGTCGCACC CGCGAGTACG TGGACATCGT GCGGACCGCG TTGCGTCGGG AGAAGGTGCG CTACGAGGGC AAACATTTCC AACTGCCGCT GCCGGACGGG CCCGGCAAGG CGTTGACGTT GACCGTGCAC CCCGTGCGGG AGCGGATCCC CATCTACTTG GCCGCGATCG GACCGAAGAA CCTGGAACTC ACCGGGGAGA TCGCCGACGG GTGGCTGCCG GTGTTCTTCT CCCCCGAGTA CGCGAGCACC CAGCTGGAAC ATGTGCAGGC GGGGGCGGCC AGGGCCGGTC GGGATCTGGC CGGGTTCGAC ATCGCTCCGA CCGTGCCGTT CGTGCCCGGG GACGACTGGA CCGTGTGCGC TGACTCCGTG CGCGCCTACG CGGCGCTGTA CCTGGGCGGT ATGGGCAGCC GGGAGAAGAA CTTCTACAAC CAACTGGCGG TGCGCATGGG CTTCGCCGAC GCCGCCGCGG AAGTGCAGGA ACGCTACCTC GCCAAAGACT ACGTGGGGGC GATGGCGGCG GTACCCCTGG AATTCCTCGA CGCGACGTCA CTGCTCGGCC CGATGGAGCG GATCGCCGAG CGGATGGCCG CGTTCGCCGA GGCGGGGGTG ACCACGTTGA GTCTGGCCCC GTTCGTCGAG CCGGCGAAGG GCACCGACGT GCTGCGCACG GCGGTGGAGG CACTGGAAAG GTCGGGAGCG GCCTGA
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Protein sequence | MSTFVRLGLN LGYWGAGNDA SNLALAKEAD TLGYSVVWVA EAYGSDAPTV LAWIAAQTSS IDIGSAVLQI PARTPAATAM TAATLDTLSG GRFRLGLGVS GPQVSEGWHG VRFTAPLGRT REYVDIVRTA LRREKVRYEG KHFQLPLPDG PGKALTLTVH PVRERIPIYL AAIGPKNLEL TGEIADGWLP VFFSPEYAST QLEHVQAGAA RAGRDLAGFD IAPTVPFVPG DDWTVCADSV RAYAALYLGG MGSREKNFYN QLAVRMGFAD AAAEVQERYL AKDYVGAMAA VPLEFLDATS LLGPMERIAE RMAAFAEAGV TTLSLAPFVE PAKGTDVLRT AVEALERSGA A
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