Gene Svir_19680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19680 
Symbol 
ID8387295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2099602 
End bp2100846 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content64% 
IMG OID644976031 
Productpredicted acetamidase/formamidase 
Protein accessionYP_003133813 
Protein GI257055981 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0111175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGG TCAAATTCCG TGTCGATCAG TCCCGGTTGT TCGCCGAGCA GGAGGTGTTA 
GGGCATAACC GGTGGCATCC GGATGTGCCG CCGGTGGCGA CGGTGCGTCC GGGTGAGGAG
TTCCGGTTGG AGTGCCGGGA GTGGTTCGAC GGCGCGATCC GTAACGACGA TTCGGCCGAT
GACGTCCGGG ATTGCGATTT CACTCAGGTG CACAAGTTGT CGGGGCCGAT CGCGGTGGAG
GGCGCTGAGC CGGGCGATCT GCTCATGGTG GACATCGTGG ATTTGGGGCC GGTGCCGCAG
GAGAAGGGGC CGGTGGCTGG TCAGGGCTGG GGGTATACGG GGATTTTCGC TCGGGAGAAC
GGCGGCGGGT TCTTGACCGA TCATTTCCCG GGTGCGTACA AGGCGGTGTG GGATTTCCGT
GGTCAAACGG CGACGTCCCG GCATATTCCG GGGGTGTCGT TCGTGGGGAT CGCGCACCCG
GGGTTGATGG GGACGGCTCC GTCGGCGGAG TTGTTGGCGC GGTGGAACAA GCGGGAGGGC
GATCTGATCG CGACGAATCC GTCGCGGGTT CCGCCGTTGG CGTTGCCGCC GACCGCGGAG
AATGCGGTGT TGGGTTCGTT GTCGGGTGCG GAGTTCGAGC GGGCGGCGCA GGAGGCGGCG
CGTACCGCTC CCCCGCGGGA GAACGGTGGG AACCAGGACA TCAAGAACCT GTCGCGGGGT
TCGCGGGTGT TTTATCCGGT GTTCGTGCCG GGTGCGAAGT TGTCGGTGGG TGATCTGCAC
TTCAGTCAGG GTGATGGGGA GATCACCTTC TGTGGTGCTA TCGAGATGGG CGGCTACATC
GATCTGCATG TCGATGTGAT CAAGGGTGGG ATGGAGGCTT ACGGCGTGGA GACGCCGGTG
TTCATCCCGG GTCGGGTGGA GCCGCGGTAT TCGGAGTATC TGGCGTTCGC GGGGTTGTCG
GTGACGGAGT CCGGTGAGCA GCGGTATCTG GATTCGCACT TGGCGTACCA GCGGGCGTGT
TTGAATGCGA TCAACTATTT GACCAAGTTC GGGTACACGC CGGAGCAGGC GTATCTGTTC
TTGGGTGCGG CGCCGATCGA GGGTCGGTTC TCGGGTGTGG TGGATATTCC GAACTCGTGT
GCGACGGTGT ACATCCCGAC CGAGGTGTTC GATTTCGATC CGAGGCCGTC GGCGGGTCCG
CCGAAGCGGG TGGATCGGGG TCAGTGTGCG GTGAGCAGTC GCTGA
 
Protein sequence
MPEVKFRVDQ SRLFAEQEVL GHNRWHPDVP PVATVRPGEE FRLECREWFD GAIRNDDSAD 
DVRDCDFTQV HKLSGPIAVE GAEPGDLLMV DIVDLGPVPQ EKGPVAGQGW GYTGIFAREN
GGGFLTDHFP GAYKAVWDFR GQTATSRHIP GVSFVGIAHP GLMGTAPSAE LLARWNKREG
DLIATNPSRV PPLALPPTAE NAVLGSLSGA EFERAAQEAA RTAPPRENGG NQDIKNLSRG
SRVFYPVFVP GAKLSVGDLH FSQGDGEITF CGAIEMGGYI DLHVDVIKGG MEAYGVETPV
FIPGRVEPRY SEYLAFAGLS VTESGEQRYL DSHLAYQRAC LNAINYLTKF GYTPEQAYLF
LGAAPIEGRF SGVVDIPNSC ATVYIPTEVF DFDPRPSAGP PKRVDRGQCA VSSR