Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18860 |
Symbol | |
ID | 8387213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2004354 |
End bp | 2005019 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975953 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003133735 |
Protein GI | 257055903 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0812431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTCG CCTCTCGTCA GCTCGAACAA GCGTCCGTCT CGCTGGCCGA CCGTGCCTAC GCCGCGCTCC AGGACAAACT GATCATGCTC GACATCCCAC CCATGGCCCC GATCGACGAC GTCGCGGTGG CCGAGTCCCT CGGCGTGGGT CGCACACCGG TCCGGGAAGC GCTCAAACGC CTCGAAGTCG ACCGGTTGGT GATCTCCTAT CCCCGTCGCG GCACCTTCGC CACCGCCGTG GACATCACCG ACCTGGCCTA CATCTCCGAG ATCCGCGTGC AGTTGGAACC CCTCGCGGCC CGTCGCGCCG CCGAGAACTC GAACGAAAAG ATCCGCGCGG AACTGGCCGA CCTCGCCGAC AAGCTCCAGC ACAACGACAT CCGCAGTCTG GGGCGCAACG AGCTGATGCA CTGGGACCTG CGTGTGCACC GCGCGATCTA TCGCGCCGCG GGGAACCCAC ACCTCGAGGA CACTCTGGTG CGCTACAACA ACCTCGCCAC CAGGATCTTC TGCCTGTTCC TGGACCGGAT CACCCACTTC GACCGGCACA TCGGTGAGCA CATCGGCCTG CTGCGGGCGA TCGCGAAAGG CGAAAGCACC GAAGCCGAAC GTATCGCCCG TGACCACGTC ACCGGTTTCG AGGCGGCGAT CCGGGCGATC GTCTGA
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Protein sequence | MTVASRQLEQ ASVSLADRAY AALQDKLIML DIPPMAPIDD VAVAESLGVG RTPVREALKR LEVDRLVISY PRRGTFATAV DITDLAYISE IRVQLEPLAA RRAAENSNEK IRAELADLAD KLQHNDIRSL GRNELMHWDL RVHRAIYRAA GNPHLEDTLV RYNNLATRIF CLFLDRITHF DRHIGEHIGL LRAIAKGEST EAERIARDHV TGFEAAIRAI V
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