Gene Svir_18560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18560 
Symbol 
ID8387183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1970734 
End bp1971096 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID644975924 
Productpredicted pyrophosphatase 
Protein accessionYP_003133706 
Protein GI257055874 
COG category[R] General function prediction only 
COG ID[COG1694] Predicted pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.254127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGG CCGATTTGCA ACGCCGTCTT CGCGCCTTCG CCGACGAGCG GGACTGGAAC 
CGGTTTCACA CCCCCAAGAA TCTGGCGATG GCACTCGCCG GGGAGGTCGG GGAGCTGCTG
GAGATCTTCC AGTGGTTGAC GCCGGAACAG TCGAACAACG TCATGAGCGA TGCGCGAACC
GCCGAGCACG TCCGTCATGA ACTGGCCGAT GTGCTGTCCT ACCTGTTGCG GCTCGCGGAT
GTGCTCGAGG TCGACCTGGC GGCGGCGCTG GTGGAGAAGA TGCGGGTCAA CGAGGCGAAA
TATCCGGTCG AGGAGGCGCG TGGCCGTGCC GACAAGTACG ACCGGCTCGC GACGGACCGG
TGA
 
Protein sequence
MELADLQRRL RAFADERDWN RFHTPKNLAM ALAGEVGELL EIFQWLTPEQ SNNVMSDART 
AEHVRHELAD VLSYLLRLAD VLEVDLAAAL VEKMRVNEAK YPVEEARGRA DKYDRLATDR