| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18480 |
|---|
| Symbol | |
|---|
| ID | 8387175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1962467 |
|---|
| End bp | 1963396 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975916 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003133698 |
|---|
| Protein GI | 257055866 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATAG ACATCGGCAT ACGACACCTG CGTGCCGTGG CCGCCGTCGC CGATGCGGGC
GGCTACACCG GCGCGGCCCG AAAGCTCCAC GTCGCCCAGT CCTCGGTCAG CCGCACGGTG
CTCGAGGTCG AGCAACGACT CGGGGTGCGG CTTTTCGAGC GCACGACTCG CCGGGTGCAC
CCCACCGTCG ACGGTGAACA GTTCCTGACC ATCGCCCGCC GACTGTTGGC CGAGTTCGAC
ACCGCCATGA ACCACTTCGA GGGTTATCTG TCCGGGACAC GGGGATCGGT GTCGATCGCA
GCACTGCCCT CGCTCGCCGC GACGATGCTG CCGCACGTGC TCGCGAAGTT CCGGACGGCA
CGGCCCGACG TGGCCGTGAC CGTCCTCGAT GGACTGTCCC AGGACGTGCT CGACCACGTG
GCGCGGGGTA GCGCCGACAT GGCGGTCACG GTCGCCGCGA CCGTGCCTCC CACGCTGCAC
GCCCGGCCCA TCGCCGTCGA CCGGTTCGTC TGCGTGTTCC CACCGGGGCA CAGGTTCGCC
GAACACAGCG AGATCACCTG GAACGACCTC GACGGCGAGG AGTTCGTCGC CTTCGACCCG
ACCAGCAGCA TCCGCGCCTA CGTCGACCGG ATACTGTCCC GGCACGGCGT GCGGCTCGGC
TCGGTGACCC AGGCACGCAA CGTCGGCGCC GTCGCCGGGC TCACCGCGTC GGGCCTCGGT
GTCTCCGCCG TGCCCGGACT CGTGCTCCCC ATGATGACGT TCGCCGAGAT CGACTCCCGC
CCCCTGGTCG AACCGGTCGT GGAACGCGAC ATCTGCCTCG TCCACGACCC CACCAGACCC
CTGTCCCGCA CCGCTTTGGC CCTCATGGAA CTTCTCGCGA ACGCCCGCTC CCAGCGACTG
CGATTACCAG CCGGTGCGCG CTGGGTGTGA
|
|---|
| Protein sequence | MGIDIGIRHL RAVAAVADAG GYTGAARKLH VAQSSVSRTV LEVEQRLGVR LFERTTRRVH
PTVDGEQFLT IARRLLAEFD TAMNHFEGYL SGTRGSVSIA ALPSLAATML PHVLAKFRTA
RPDVAVTVLD GLSQDVLDHV ARGSADMAVT VAATVPPTLH ARPIAVDRFV CVFPPGHRFA
EHSEITWNDL DGEEFVAFDP TSSIRAYVDR ILSRHGVRLG SVTQARNVGA VAGLTASGLG
VSAVPGLVLP MMTFAEIDSR PLVEPVVERD ICLVHDPTRP LSRTALALME LLANARSQRL
RLPAGARWV
|
|---|
| |