Gene Svir_18220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18220 
Symbol 
ID8387149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1889409 
End bp1890065 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID644975890 
Productpredicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
Protein accessionYP_003133672 
Protein GI257055840 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT CTGTCCGCGT CGACGTGTGG TCCGACATCG CGTGTCCGTG GTGCTACATC 
GGCAAGCGCA AGTTCGAAGC CGCCCTGGCC GAGTTCGACG GCGCTGCCGA TGTCACCGTG
ACCTACCGCA GCTTCGAACT CGCGCCGGAC ACCCCGGTGG ACTTCGACGG CAGTGAGATC
GACTTCCTGG CCGGGCACAA AGGGATGCCC CGCGAGCAGG TCGAACAGAT GCTGCGACAG
GTGTCGGCGG TCGCCGAGTC GGTCGGTCTC CGCTACGACT TCGACGCGCT GCGCCACACC
AAGACGCTGC TGGCCCACCA GGCGCTGCAC CATGCCAAGA AGCACGGTAA GCAGCTCGAT
CTGGTGGAGC GGCTGTTTCA GGCCTACTTC ACCGAAGGGC GGCACGTGGG CCGAGCCGAA
GAGCTGGCCG AGCTGGCCGC CGAGGTGGGG CTCGACCGCG ACGAGACGTT CCGGAAGTTG
CAGGAAGGCA CCTACGCCGA CGCCGTGCAG GACGACCTGC GGCAGGCCAA GGCCTTCGGC
ATCCGCGGCG TGCCGTTCTA CGTGTTCAAC GAACGCTATG CCGTCTCCGG CGCGCAGCAG
CCCGACGTCT TCCTCCAAGC ACTCCGAAAG GCGCGATCCG AGGGGGTGTC CTCATGA
 
Protein sequence
MSASVRVDVW SDIACPWCYI GKRKFEAALA EFDGAADVTV TYRSFELAPD TPVDFDGSEI 
DFLAGHKGMP REQVEQMLRQ VSAVAESVGL RYDFDALRHT KTLLAHQALH HAKKHGKQLD
LVERLFQAYF TEGRHVGRAE ELAELAAEVG LDRDETFRKL QEGTYADAVQ DDLRQAKAFG
IRGVPFYVFN ERYAVSGAQQ PDVFLQALRK ARSEGVSS