| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18200 |
|---|
| Symbol | |
|---|
| ID | 8387147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1887572 |
|---|
| End bp | 1888987 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975888 |
|---|
| Product | subtilisin-like serine protease |
|---|
| Protein accession | YP_003133670 |
|---|
| Protein GI | 257055838 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAT TCAGATCCCT GCTGTTACCC GCCGCCCTGA CCTTGGGCGT CGGCGGTGTG
CTGGCCGCTC CCGTGGCCGC CGCCGAACCC ACCGCAGCGG CGGAGTGCGA CACCACCAGC
ACCCCCTACA CCTACGTGGT GCTGTATCAC CCGCGCACGC CGCAAGCCGT GGTCGACGCC
GAACTGGCCG CCAAGTGCGG GGAGCGGGTC GCCTACTACC CGGAGATCGG GGTGGCGGTG
GCCAGCTCCC GTAACGCCGA CTTCGCCGAC CGGATCGGTG TCTACCGCGC CTACTCCGGC
TCCCGCGAGG TCGCCCACCC CGACACGGCG GCCGCGGTGG CCCGGGCGCA GGCTCGTGCG
GAGGTCGAGA CCGAGGAGAC CGTCGACGTG GTCTCGACCG CGGATCTCTC CGCGCAACAG
TGGGACATGC ACATGATCCA CGCGCCGGAA GCCCATGCGA TCAATGAGGG CAGTCCCTCG
GTCACGGTGG GCGTACTGGA CTCCGGGATC GAACCCACTC ACCCGGCGCT GGTCGACTCG
CTGGACCCGG AAACCTCCGT CGGCTGCAAC ACGGGCGCAC CTGACACCCG CCCCGAGGCG
TGGGCTTCGA CGAACATCGA CCACGGCACC CACGTCGCCG GCACGATCTC CGGCAAGGAC
ACCGAGCGCG GTTTCACCGG TGTCGCCCCC GGCGTGCGGA TCGCGTCGGT GAAGGTCGTC
AACGACGAGG GCTACATCTA CCCCGAAGCG GCGGTCTGCG GTTTCATGTG GGCGGCCGAG
CACCGTTTCG AGGTGACCAA CAACAGTTAC TACGTCGACC CGGGGATGTT CTACTGTCCG
AGCCAACCCG GTGACGCGGC GGCCTACGAA GCCGTGCGGC GTGCGGTGGC CTACTCCCAG
AAGCGGGGCG TGCTCAACGT CGCCGCGGCC GGCAACAGCG ACTTCGACCT GGCGGACCCG
CCGGCCGACG ACCCCAACCG CCAGCACCCT GTGAACTCCG GGTGCGCCAT CCTGCCCAAG
GGGCTCGACG GTGTGGTGAC CGTTTCGTCC GTCGGCTACG AAGCCACCAA GTCCTCGTTC
AGCAACTACG GCCTCCGCGA GGTCGACGTG GCCGCACCGG GTGGCGACCG TGATCAGTTG
CCCCCGGGAG CGACGTCGGG CTGCATCCTC TCCACGGTGT TCAACGGCCA GTACGGCACC
AAGTGCGGCA CCTCGATGGC CGCGCCACAC GCCGCCGGAG TGGCCGCGCT GATCGCCAGC
AAACGTCCCC AGCTTCCGCC GCAGGCCATC TCGGCACTGC TGCGGGCCAA GGCCGACAAC
ATGCCCTGTC CCGACGACGA CCGGTGCACC GGTCCTGCGG CGTACAACTC GTTCTACGGC
CACGGGCTCG TGAACGCGCT GGCCGCCGTC AAGTAA
|
|---|
| Protein sequence | MSRFRSLLLP AALTLGVGGV LAAPVAAAEP TAAAECDTTS TPYTYVVLYH PRTPQAVVDA
ELAAKCGERV AYYPEIGVAV ASSRNADFAD RIGVYRAYSG SREVAHPDTA AAVARAQARA
EVETEETVDV VSTADLSAQQ WDMHMIHAPE AHAINEGSPS VTVGVLDSGI EPTHPALVDS
LDPETSVGCN TGAPDTRPEA WASTNIDHGT HVAGTISGKD TERGFTGVAP GVRIASVKVV
NDEGYIYPEA AVCGFMWAAE HRFEVTNNSY YVDPGMFYCP SQPGDAAAYE AVRRAVAYSQ
KRGVLNVAAA GNSDFDLADP PADDPNRQHP VNSGCAILPK GLDGVVTVSS VGYEATKSSF
SNYGLREVDV AAPGGDRDQL PPGATSGCIL STVFNGQYGT KCGTSMAAPH AAGVAALIAS
KRPQLPPQAI SALLRAKADN MPCPDDDRCT GPAAYNSFYG HGLVNALAAV K
|
|---|
| |