Gene Svir_18040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18040 
Symbol 
ID8387131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1872615 
End bp1873643 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID644975872 
ProductADP-ribosylglycohydrolase 
Protein accessionYP_003133654 
Protein GI257055822 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0992393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGG ACGTCTACGA CCGCGCGCTC GGCGCGCTCA CCGGCCTCGC TCTCGGCGAC 
GCGTTGGGCA TGCCCACACA ATCGATGTCA CGGGAAGCGA TCAGGACCCA CTACGGTCCC
ATCCGGTCGC TACGCGACGC CGTGGCGGCC CAGCCGATCT CCCCCGGACT CCCCGCGGGA
ACGGTCACCG ACGACACCGA ACAAGCCGTC CTCGTCGCCC GGCTCCTCAT CGACGGCGAA
GGGCGGATCG ACCCGAAGAC CTTCGCCAAG TCGTTACTCG ACTGGGAATC CGACATGATC
CGCCGCGGCC TGGCCGACCT GCTCGGGCCC TCCACGAAAC GAGCCCTCGA GCTCCTCGAA
GCCGGGGTGG CTCCCGAGCA AGCCGGGAAG ACGGGCACCA CCAACGGTGC CGCCATGCGG
ATCACGCCCG TCGCCATCGC CACCCCACCG GAACTCGACC GGCTGCTCGA CGCCGTGGTC
GCCGCGAGTG AACTGACCCA CAACACCAAT CTCGGTATCG CCGCGGCCGC GGCCGTCGCC
GCCGCGGTGT CCGCCGGCAT CGACGGCGCC GACCTGCCGA CCGCGCTCGA CCACGCCGAA
CACGCGGCGG CCGCCGGGGC CCGACGTGGC CATTGGAGCG CCGGCGGTGA CATCGCCGCG
CGCATCCGCT GGGCCCGCCG CTGGGTTCGC GGTATGGACA CCGACACCCT CGCCGACGCC
GTGTGCGACG TGATCGGCAC GTCGGTGGCC TCGCAGGAAT CGGTCGTCGC GGCGTTCGCC
CTCGCCGAGG CACTCGGCGA CGAACCCGTG GAGGCGCTCA CGCTGGCCGC CGAGCTCGGT
GGCGACACGG ACACGGTCGC CGCCATCTGC GGCGCCATCC TCGGCGCCCG ACACGGGGCT
TCCGGTCTTC CCCGCGACCT CACCACCACG GTGGTGGAGG TCAACGGGCT CGAACTCGAG
CCTGTCGCCG ACGGGCTGCT TCGGCTTCGC TCTCGGCCAG GCACGGTCCA ACGAAGGAGA
CGTCCATGA
 
Protein sequence
MTQDVYDRAL GALTGLALGD ALGMPTQSMS REAIRTHYGP IRSLRDAVAA QPISPGLPAG 
TVTDDTEQAV LVARLLIDGE GRIDPKTFAK SLLDWESDMI RRGLADLLGP STKRALELLE
AGVAPEQAGK TGTTNGAAMR ITPVAIATPP ELDRLLDAVV AASELTHNTN LGIAAAAAVA
AAVSAGIDGA DLPTALDHAE HAAAAGARRG HWSAGGDIAA RIRWARRWVR GMDTDTLADA
VCDVIGTSVA SQESVVAAFA LAEALGDEPV EALTLAAELG GDTDTVAAIC GAILGARHGA
SGLPRDLTTT VVEVNGLELE PVADGLLRLR SRPGTVQRRR RP