| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17300 |
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| Symbol | |
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| ID | 8387059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1787032 |
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| End bp | 1788060 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975803 |
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| Product | CRISPR-associated protein, Cas1 family |
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| Protein accession | YP_003133585 |
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| Protein GI | 257055753 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTGG CCGATATCTG GTGGAAAGCC CACCCCCACG ACCTGCACCG GCTCACGGAC
CGTGTCTCGA GCGTCTACAT CGAACGCAGT CACCTCGATC GCGCGGAGAA CGCGATCGCC
ATCATCAACC GTCGTGAGAC CGTGCGGCTT CCCGCCGCAC TCGTCGCCGT GGTGCTGCTC
GGGCCGGGAA CCCGTGTCAC TCACGGCGCG ATGCAGTTGC TCGCGGACTC GGGCACGGCG
GTGTGCTGGG TCGGCGAACA AGGCGTCAGG ATGTATGCCG CGGGGCTCGG CCCCAGCCGG
GGCGCGGCGC TGCTCCAGCG ACAAGCGTAT TTGGTCAGTC GCACCACAAC GCGGCTGGAG
GTGGCCCGGG CCATGTATGC CATGCGGTTT CCCGGCGAAG ACGTCTCCAC GCTCACCATG
CAGCAGCTAC GCGGCCGGGA AGGCGCACGC GTCCGCAAGG TCTATCGGCA ACAGGCGCGA
CAACACGGTG TGCCCTGGAA CGGACGTGCC TACAAGGCAG GGGACGCCTT CGCGGTCGGC
GATGACCTCA ATCGCCTGTT GTCCGCCGCC AACGCCGCTC TCTACGGCAT TTGCCACGCC
GTCATCGTGG GGCTGGGAGC CAGCCCCGGT CTCGGGTTCA TCCACACCGG CTCGGCGACC
TCCTTCGTGA TGGACATCGC CGACCTGTAC AAAGCCGAAT ACACCATCCC GCTGGCCTTC
CAGCTCGCAG CGCGAGGTCT CCTTGAGGAA CGTGACGCCC GAACCGCACT GCGCGACCGT
ATCGCCGGTA CCGGCCTGCT CCCGCGCATC ATCAAGGACG TCAAGACACT ACTGGCACCC
GAAGGGGTCG ACCTGCCCGA TCCGGAGGTG AACCTGCTCT GGGACGAGCG AGGGAATCCC
GTCCCCGGCG GGGTGAACTG GTCCGATGAC TTCGATTTCC CGGTGATCGA CCCCAGCATG
GACCAAACCC ACATCTCTGT GATCGGTCCC GAATTCGACA CACCCACCAC AGAGGCCGGG
GAGTCATGA
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| Protein sequence | MSVADIWWKA HPHDLHRLTD RVSSVYIERS HLDRAENAIA IINRRETVRL PAALVAVVLL
GPGTRVTHGA MQLLADSGTA VCWVGEQGVR MYAAGLGPSR GAALLQRQAY LVSRTTTRLE
VARAMYAMRF PGEDVSTLTM QQLRGREGAR VRKVYRQQAR QHGVPWNGRA YKAGDAFAVG
DDLNRLLSAA NAALYGICHA VIVGLGASPG LGFIHTGSAT SFVMDIADLY KAEYTIPLAF
QLAARGLLEE RDARTALRDR IAGTGLLPRI IKDVKTLLAP EGVDLPDPEV NLLWDERGNP
VPGGVNWSDD FDFPVIDPSM DQTHISVIGP EFDTPTTEAG ES
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