| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17140 |
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| Symbol | |
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| ID | 8387045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1767810 |
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| End bp | 1769387 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644975789 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_003133571 |
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| Protein GI | 257055739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTA GTTTCGATCT CGCCGAGCGC GGGTTCTGCC CGGTGAGATG GCGTGCAGGG
CAGCGGCCGG AGACATTCAG TCCGGAAGCG TCGCTGGGTT TGGTCGATCT GTTGCTGCAC
GCCCATCGGA TCGAGGATGT GGAGATATCA CCACCCCCGG CACTGTCGGG CTTCCTTCGC
ATCCTGGCGG TACTGACCGG ACGGATCACG GGCTTGGACC GCATGGAGTC CTTCGAGGAC
TGGGAGGAGG CGCGCGAGGA TCTTCTGCAC GCAGGGCGGT TCGACGAAAC GGCGATCCGC
CGGTACTTCG ACGAGTTCTC AGGGCGTTTC GAACTCTTCC ACACCGCGAC GGCACGCCCT
TTTCTGCAGG ATGCGCGTCT GCTCGAACAA TGCCGGGACC CCCAAGGTGA CCAGGTCAGT
TCCGGTGTGA ACAAACTTGT CCTGAACCGT GCCGCAGGAC AAGCGTTCGT GTGGCAAAGC
CACACGGTCG ACGCCGACCC CTCTCCGGCC CCTGTGGCAG AGGCGGTGTG GTCACTGCTG
ACATGGCTGT ATTACGGTCC GCCCGGCTGC TGCACCGCAC GTCAGGTGGG AAAGACAAGG
GCGGGAGACA CCAAGGTGGG CCCGTTACGG GGAACGGTCT CTTACCACCC TGTGGGCAAG
AGCCTCTTCC ACACGCTGGT GCTGGGACTT CCTTATGTTC CGCGGCATGA GCACGATGCC
GCACCGTGGG AGGAAGAACC GCGCGACCCG TTGAGCGTGC CCCCGCCGGT GCAAGGATTG
GCGCGAAAGT TGACCGGCCG CTTTCGGCAC GCGGTGCTTC TCACTCCTTC CGAATCCGGT
GACACGGTGG TCGATGCTCG AATCACGTGG GCCTGGCGCG AAGAGCACGC GCCGGTCGAA
GACCCGTATG TGATGCACCG CGTTCCCACG AACGGTGGTG CTCCGATTCC AGAATCGGCC
TCGGCAGCTC GGGCGGTGTG GCGGGACCTG GACGCCTTGC TGGGGAGGAC AGAACAACGC
CGACGACCGG AGGTGCTCGC CCACCTGGAC GAACTGGCAG TCGACGAGGG AGTGTTCACA
GCGATCCGGG CGCTCGGCTT CGACCAGGAC CGCTCCAAGG TCAAAGACCG TCAGTACTTC
TCAGGGATCA CACCACCGGT GTTGGAGGCG TGGCAAGCAC GTGATCCGCG CCGGTGGGCA
CAGCTTCGAG AAGCCCGAGA GGCCGCGGAG AAGACCGCGT GGCGGCTGCA GGAAGCGCTC
TCCGGACTGT GGCAGAAGCT CAAGCCCAGT AAGACGACCA ACGGCAAGGC GCGTGATCGT
GGTGTTCCGT GGCTGCACAA GGCGATGACG ACGTACTGGC AATCAGCGGA ACGGTGCTTC
TGGGAAGCGG TACGCGCCGA CGAAGCCTCT GTCCCGGTGC GGAACCGAAT GATCGAGGTC
GCTTTGCGGA CATACGACGC AACCACCGCC GACCTCATGC GCCAACCGAA GCAGGTGAAG
GCGGTGGAAG AACATCGCCG TGGTCTGTGG TGGGGATGGC GTTCGGAAGC TAAGGCGAAC
GGAGAAGAAG ATGGCTGA
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| Protein sequence | MATSFDLAER GFCPVRWRAG QRPETFSPEA SLGLVDLLLH AHRIEDVEIS PPPALSGFLR
ILAVLTGRIT GLDRMESFED WEEAREDLLH AGRFDETAIR RYFDEFSGRF ELFHTATARP
FLQDARLLEQ CRDPQGDQVS SGVNKLVLNR AAGQAFVWQS HTVDADPSPA PVAEAVWSLL
TWLYYGPPGC CTARQVGKTR AGDTKVGPLR GTVSYHPVGK SLFHTLVLGL PYVPRHEHDA
APWEEEPRDP LSVPPPVQGL ARKLTGRFRH AVLLTPSESG DTVVDARITW AWREEHAPVE
DPYVMHRVPT NGGAPIPESA SAARAVWRDL DALLGRTEQR RRPEVLAHLD ELAVDEGVFT
AIRALGFDQD RSKVKDRQYF SGITPPVLEA WQARDPRRWA QLREAREAAE KTAWRLQEAL
SGLWQKLKPS KTTNGKARDR GVPWLHKAMT TYWQSAERCF WEAVRADEAS VPVRNRMIEV
ALRTYDATTA DLMRQPKQVK AVEEHRRGLW WGWRSEAKAN GEEDG
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