| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17130 |
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| Symbol | |
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| ID | 8387044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1764796 |
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| End bp | 1767555 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644975788 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_003133570 |
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| Protein GI | 257055738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.390014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCTGG TCGATCTCCG TTTCTGGGGG AAAGAACGGG GGCTGGAGGG GGCTCGGTAC
CCGCTGGTAT GCCATGGCCT CGATGCGGCT GCTGCGGTGC GCTGGTTGTG GAAGCGATAC
CTGTCCGCGC GTGTTCGGGC GGGGTTGGCC GAAGCCGTGG GCTTGACCGA GGAGCAGACG
TGCCGTGTCC TGGAGTTCTG GGCCGCTGCG CATGACGTCG GCAAACTGAC CCCGGGATTC
CAGGAGCAGG TCGGTGTCCC GGAAGGATAT CTGCCGGATT CGACAGGACG GCGGTGCAGG
CATGAGGAGG CTTCCCACAT ATGGCTTCCG AGTGCTTTGA CGGCCGTCGA GCACACGACG
AATAGCCGGA ACGCGCGGCT CATCGCGCAG ATGTTGGGGG GCCATCACGG GGTCTTCCGT
CGTCGCGATT CCGCTGATTT CCGCCCCGGC ATGTTCGTCC ACCTCGGCTT GGGTGACTCC
TCGTGGGACC TGCAACGACA TGCACATCTA CAAGCGTGGC GGGCGTTGTT GGAACCGCCC
ACCTTGCCCC GGCGGTTGAG CCGCCACGCC GCCGCTGTCG CAACGGGTGT TGTGATCCTC
GCGGACTGGC TTGTGAGCCA GATCGATTAC GTGCGTTCCC GCCTTCCCTC CCTGCCGGAA
CAAGGTGATC TCCCCTCGTT GAGTGAGTTC TTGAGTGGAT CACGGGAAGC GACGGAGTCC
GTGGTCAGGC AGGCAGGACT GTCCCGGCTG CGTCTTCGCG GGGGAACCTT CGAGGAAGAG
TTCGGCTTCG ATGAGCCGAA CGAGCTGCAA AGCAGTATCG CAGCGGAGCT TCCCGGACTG
CTGGGGAACC CGGGCCTGTT GATGATCGCG GCCCCCACGG GATTCGGTAA AACCGAGGCC
GCCTTGCACG CTGCGCGTCT GTTGAGCGAC GCCGCCGGTA CCTCGGGCAT GTTCTTCGCA
CTGCCCACCA TGGCGACGTC GGATGAGATG TTCAACCGGA TCGCCCGCTA CGTGGTCCGC
CGAGCAGAAA CCGGTGTCGC GCAGTCACTG TTGCACGGCA TGGCGTGGCT CAAACCGCTA
CGGGAGACCC TTGAGCAGAT CCACGCCGAG GAGGGGCTCA GCAGTGATGA CGAGACCCAA
GTTCACGGGC TGGAGTGGTT GCAGGGTCTG AAACGCGCGA TGCTGGCGCC TGTCGGTGTG
GGCACGATCG ACCAAGCCTT ACTCGCCGTT CTGCCGGTTC GCCACAACGC GCTCCGGTTG
TTCTCGCTGC TCGGCAAAAC CGTGGTGATC GACGAAGTCC ACGCCTTTTC GCCCTACATG
CGTCGGTTGC TGTGCACCTT GCTGGGCTGG TTGGGTGAGT GGAACGTACC CGTGGTGCTG
CTGTCCGCCA CGCTGCCACG CAACATCGCC GCGGAGCTCG CGGCGGCGTA TCGGGGACAG
AACACCGGTA CCCCGCCCGA CGTGCCTGTT CCTTACCCGG GTTGGACCTA CATCGAACGG
GAAAGCGGGA TCAAGACCCG GTCGGTGGAC TTCCCCCGAT CCCACCGCCG CACCCTCTCC
GTTCAGCTTC GCCCTGTGGC TGTGGCACGG GAATCCGGGC CGGACCGGCT CCCGGTGCTG
CGTGAAGTGC TCGCACCGAT CGTCGTGGAC GAAGGCGGTG GATGTGCGTT GGTGCTGTGC
ACCACGGTTG CCGAGGCCCA GCAAACCTAC CGGGCCCTCC GTGACTGGTT GGGCGAAACG
GACGTGGACC TGCGCCTGCT CCACGCCCGC TATCCGATGC ACCGACGCGA AACGTTGACC
GCGGAGCTGA TGCGCGCTTT CGGTAAACCG CAACACGGAG ACGGTGGTGC TTCCCACGTC
GGGAACCGTC CCGCGAAGGC GGTGGTCGTC GCGACCCAGG TCGTGGAACA GAGCCTGGAT
CTGGATTTCG ACCTGGTCGT CAGTGATCTG GCACCGATTG AGCTGTTGCT CCAACGGGCT
GGACGCCTGC AACGGCACTC GGGCTGGGAT CCACACCGTC CGGCGTGGGC GGATGTGTCC
CGCGGCGGGC AGCGTCGTTT CATCGTGTTG ACGGCACCTG ACGGTGACCT GCATCGGCTG
CCCAGGTCGT GGAAGTTCAT CTACCCACCG ATCAGCTTGA TTCGCGCGCA CCGGCTCTTG
GCCGAACGTG CCGCACGGGG AGTCCGCATT CCCGACGATG TGCAAGAGCT GGTGGATCGA
GGCAATCCCG GCCAGTTTCC CGACCTCGAT GATCCCTCGG TCAGTGGGTT CACCGAGGAG
GAAATCCGTC GCTCGGCGGA GTCCTTGGTC GAGACCGGGA CCGCGGACTC CGCGAGCATC
CCGGTTCCGA AAGCGCTGAC GAACCTCACC GACCTGTCGA AAGGACCGTT GGAGGAAGAA
CAGGTCACCA CGCGCTTCAA CGCCGACTCG CATCGAGCGC TGCCGGTGTT CCGGACCCAT
GACGGAGCCC TTCGCCTGGG TGGCGCGCAC GGAGAACCTC TTCCCGTCCC GCGGGAGGGC
AAGCTGAGCA AGGACGAACT CAAGAGCATC ATGAAGCACA CCGTCCCGGT GCCCGGTTCC
GTGGTGCGAG GAAAAGACGA ACGACATCAG CTTCCCGAGC CGTGGCGGGA GATCACTGTG
CTGCGCGATC TCGTCGTGTT GCCACACCAC ATCGACGAGG ACGGGACCGT CCACCCCGCC
TCCGTAGGGG GTCGAAAACT CCTGCTGGAC GACGTTCTCG GCTTACTCGC CGTCGAATGA
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| Protein sequence | MLLVDLRFWG KERGLEGARY PLVCHGLDAA AAVRWLWKRY LSARVRAGLA EAVGLTEEQT
CRVLEFWAAA HDVGKLTPGF QEQVGVPEGY LPDSTGRRCR HEEASHIWLP SALTAVEHTT
NSRNARLIAQ MLGGHHGVFR RRDSADFRPG MFVHLGLGDS SWDLQRHAHL QAWRALLEPP
TLPRRLSRHA AAVATGVVIL ADWLVSQIDY VRSRLPSLPE QGDLPSLSEF LSGSREATES
VVRQAGLSRL RLRGGTFEEE FGFDEPNELQ SSIAAELPGL LGNPGLLMIA APTGFGKTEA
ALHAARLLSD AAGTSGMFFA LPTMATSDEM FNRIARYVVR RAETGVAQSL LHGMAWLKPL
RETLEQIHAE EGLSSDDETQ VHGLEWLQGL KRAMLAPVGV GTIDQALLAV LPVRHNALRL
FSLLGKTVVI DEVHAFSPYM RRLLCTLLGW LGEWNVPVVL LSATLPRNIA AELAAAYRGQ
NTGTPPDVPV PYPGWTYIER ESGIKTRSVD FPRSHRRTLS VQLRPVAVAR ESGPDRLPVL
REVLAPIVVD EGGGCALVLC TTVAEAQQTY RALRDWLGET DVDLRLLHAR YPMHRRETLT
AELMRAFGKP QHGDGGASHV GNRPAKAVVV ATQVVEQSLD LDFDLVVSDL APIELLLQRA
GRLQRHSGWD PHRPAWADVS RGGQRRFIVL TAPDGDLHRL PRSWKFIYPP ISLIRAHRLL
AERAARGVRI PDDVQELVDR GNPGQFPDLD DPSVSGFTEE EIRRSAESLV ETGTADSASI
PVPKALTNLT DLSKGPLEEE QVTTRFNADS HRALPVFRTH DGALRLGGAH GEPLPVPREG
KLSKDELKSI MKHTVPVPGS VVRGKDERHQ LPEPWREITV LRDLVVLPHH IDEDGTVHPA
SVGGRKLLLD DVLGLLAVE
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