Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_17110 |
Symbol | |
ID | 8387043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1761657 |
End bp | 1762295 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975787 |
Product | hypothetical protein |
Protein accession | YP_003133569 |
Protein GI | 257055737 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.46381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCAAGA CGATGCGGGT GATCGCCCGC GACGGGGAGC ACGAGGTCGA GATCCAGCGG TCACGGTTCC TGTGCACGGT GGCCCGGGTC TTTGACGTCG ACGACGCCTA CGCGGTGATC TCGCGGGTGC GCAAGGCCGG CCCGAACGCC AACCACCACT GCTTCGCCAT GCGGATCGGC GACCCGGAGA CCGGTGAGCT CACAGCCCGC AGCAACGACG ACGGCGAACC GTCGGGTACC GCGGGCGTGC CCATGCTGGA AGTGCTGACC CGACGCGAGC TGACCGACGT CGTCGCGATC GTGTCCCGCT GGTTCGGCGG TATCAAACTC GGTGCCGGGG GCCTGGTCCG CGCCTACTCC GGTGTGCTGG CCGAGACGCT GGACATCGTC GGCGAACTCC GCCGGGTCCG CCACCGCGAA CTGCTGCTGG CACTCCCCCA CGACCGCGCC GGACGTCTGG AGCACCAGCT ACGCAACTCG CCGTACCGGC TGCAAGAGGT GGAGTACGGC GCCGACGTCA CGTTCACCGT CGCCGTCACC GAGGACGCCG TGACGGATTT CAAGACCTGG CTGGCCGAAC ACACCGGTAC GACGGTCGAC GTCATCGACG CCGGGCCCCG GGATCTCTAT CTGCCGTGA
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Protein sequence | MGKTMRVIAR DGEHEVEIQR SRFLCTVARV FDVDDAYAVI SRVRKAGPNA NHHCFAMRIG DPETGELTAR SNDDGEPSGT AGVPMLEVLT RRELTDVVAI VSRWFGGIKL GAGGLVRAYS GVLAETLDIV GELRRVRHRE LLLALPHDRA GRLEHQLRNS PYRLQEVEYG ADVTFTVAVT EDAVTDFKTW LAEHTGTTVD VIDAGPRDLY LP
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