| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16760 |
|---|
| Symbol | |
|---|
| ID | 8387008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1730060 |
|---|
| End bp | 1731268 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975752 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_003133536 |
|---|
| Protein GI | 257055704 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCG CCTACGACGC CACCACCGAA CGGTATCGCG AGAAGTTGCT CGCGTTCATG
GACGAGCACG TCTATCCCGC CGAACCCGTC CTCGCCGAGC AGACCCGGGT CACCGACGAT
CCATGGGCCA CTCCTCCGAT CATCGAGGAG CTCAAGGCCG AGGCCCGGAA GCGGGGACTG
TGGAACCTGT TCCTGCCCGG CGAACACGGT GCGGGACTGA CCAATCTCCA GTACGCCCCC
CTGGCCGAGA TCACCGGCCG CAGCCCGCAC ATCGCACCGC TCGTCACCAA CTGCGCGGCA
CCCGACACCG GCAACATGGA ACTGCTGGCG GAGTTCGGCA CCCCACGGCA ACAGCAGCAA
TGGCTGCAAC CGTTGCTGGA CGGTGAGATC CGCTCGGCCT TCGCCATGAC GGAGCCCGAC
GTGGCCTCCT CCGACGCGCG CAACATCGGT ACCCGCATCG AGCGGGACGG CGAGGAATAC
GTGATCACCG GTCGCAAGTG GTTCATCTCC GGTGCGATGA ACCCGCGCTG TCGGATCTTC
ATCGTCATGG GCAAGACCGA CCCGGACGCC GAACCGCATC GCCAACAGAG CATGGTGCTC
GTGCCCCGGG ACACCCCCGG GGTGCACGTG AAACGGGCGA TGACCGTGTT CGGTTACGGC
GACGAGGAAT CCAGCGGACA CGCCGAGATC GTCTTCGACC GGGTGCGTGT CCCCGCCGAC
AACATCATCG GCGGGGAGGG GGACGGCTTC GCCATAGCGC AGGCCAGACT CGGCCCCGGC
CGCATCCATC ACTGCATGCG CGCCATCGGC ATGGCCGAAC GCGCCATCGA ACTGATGTGC
CGCCGCGCGG TCGCGCGGGT CGCGTTCGGT AAACCCCTGT CCGAGCAGGG CGTGGTCCAG
GACTGGATCG CCGAGTCCCG GGTGCGGGTG GAACAGCTGC GCCAACTGGT GCTGAAGACC
GCGTGGCTGA TGGACACGGT GGGCAACAAG GGCGCCCACA CCGAGATCCA GGCCATCAAG
ATCGCCACGC CCCGGACCGT GGAGTGGATC CTCGACAAGG CCATCCAGGT GCACGGCGCG
GCCGGGGTGA GCCAGGACTT CCCCCTCGCC TCGCTGTGGG CGGCGGTGCG CACGTTGCGG
CTCGCCGACG GCCCCGACGA GGTGCACAAA CGTTCCTTGG CCCGGCGAGA GCTGAAGAGG
TACCTGTGA
|
|---|
| Protein sequence | MDFAYDATTE RYREKLLAFM DEHVYPAEPV LAEQTRVTDD PWATPPIIEE LKAEARKRGL
WNLFLPGEHG AGLTNLQYAP LAEITGRSPH IAPLVTNCAA PDTGNMELLA EFGTPRQQQQ
WLQPLLDGEI RSAFAMTEPD VASSDARNIG TRIERDGEEY VITGRKWFIS GAMNPRCRIF
IVMGKTDPDA EPHRQQSMVL VPRDTPGVHV KRAMTVFGYG DEESSGHAEI VFDRVRVPAD
NIIGGEGDGF AIAQARLGPG RIHHCMRAIG MAERAIELMC RRAVARVAFG KPLSEQGVVQ
DWIAESRVRV EQLRQLVLKT AWLMDTVGNK GAHTEIQAIK IATPRTVEWI LDKAIQVHGA
AGVSQDFPLA SLWAAVRTLR LADGPDEVHK RSLARRELKR YL
|
|---|
| |