Gene Svir_16480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16480 
Symbol 
ID8386980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1698187 
End bp1699002 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID644975724 
Productconserved hypothetical protein TIGR03084 
Protein accessionYP_003133508 
Protein GI257055676 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03084] conserved hypothetical protein TIGR03084 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGACG TCAGTGCGAT CGTGCGGGAC CTGGACGCCG AAGGCGACGA AGTCGACGCG 
CTGGTCGCCG AACTCGATGA GTGGGAGTGG GCGCTGCCGA CCCCCGCACC GGGATGGACG
ATCGCCCATC AGATCGCCCA TTTGGCGTGG ACCGACGACA AAGCGCTCCT CGCCCTACGG
GAACCGGAAC GGTTCGTCCG CGAAAGCATC GACCCGTCCG CTGTGGACGA AAACGGGGAC
AGTGTCGTCG ATCGGAGCGC CGCACAGGGT GCGTCACGAC CCATCGCGGA GCTGCTGCGG
TCCTGGCGGC GGCGACGTGC GGAATTGAGC GCGGCCCTGA TCGCCGCGCC GCCGGGGACC
CGACTGCCGT GGTTCGGTCC GCCCATGAGC GTGGCGTCGA TGGCCTCGGC GAGGTTGATG
GAGACATGGG CGCACGGACA GGACATCGCC GACGTGCTCG GGGTACGACG CAGTCCGACC
GCGCGGTTGT GGCACGTGGC CCGGCTCGGC GTGCGCACCC GCGATTTCGC CTTCGCATCG
CACGGACTGA CGGTGCCGGA CGAGGAGTTC CGCGTCGAAC TCACCGCACC CGACGGCGGT
ACGTGGGCCT TCGGGCCGAA GGAGGCGACC CAGCGGGTCA CCGGTGACGC GCATCAGTTC
TGCCTCGTGG TGACCCAACG TGCGCACGTG CTCGACACCG AGCTTCGGGC GGAAGGGGAG
CAGGCCGCGA CGTGGCTGAC GATCGCGCAG GCGTTCGCGG GCCCACCCGG TAGGGGACGT
GCTGCGGAAC GGACCACCGG AAGGACCGTC TCGTGA
 
Protein sequence
MADVSAIVRD LDAEGDEVDA LVAELDEWEW ALPTPAPGWT IAHQIAHLAW TDDKALLALR 
EPERFVRESI DPSAVDENGD SVVDRSAAQG ASRPIAELLR SWRRRRAELS AALIAAPPGT
RLPWFGPPMS VASMASARLM ETWAHGQDIA DVLGVRRSPT ARLWHVARLG VRTRDFAFAS
HGLTVPDEEF RVELTAPDGG TWAFGPKEAT QRVTGDAHQF CLVVTQRAHV LDTELRAEGE
QAATWLTIAQ AFAGPPGRGR AAERTTGRTV S