Gene Svir_16470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16470 
Symbol 
ID8386979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1697140 
End bp1698015 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID644975723 
ProductEnoyl-CoA hydratase 
Protein accessionYP_003133507 
Protein GI257055675 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.847675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAACC ATGTCGACGA CGGCGACGGT ACCGACTACA CCCAGATCAC CTACCGGGTC 
GCCGATCGGA TCGCGACCAT CACCCTCAAC CGGCCCGAAG CCCGCAACGG CTACACCGTC
ACCATGGCCG ACGAACTCAC TGACGCCCTC ACGCGTGCCG ACCACGATCA CGACGTGCGG
GTCGTGGTGC TCACCGCCAA CGGCCGTGAC TTCTGCGTCG GCGCCGACCT GAGCCAGGGT
GGGTTCGACT TCGACGCCGA CACCGGTCCC GACGCCGCGT GGCAGGAGCC CGCCGGCCGC
GTGTCCCGCC GTATGTTCGC GTCGAACAAA CCGATCATCG CCGCGTTGCA CGGTGCGGCG
ATCGGCGGGG GGATCACCAT CACCCTGGCG GCCGACTACC GCCTGGCAGC CACCGACGCG
CGCTTCGGGT TCGTCTTCGT GCGTCGCGGT ATCTACCCCG AAGGCGCCTC GGCATGGTTC
CTGCCCCGTC TTGTGGGTAT GGGGCGGGCA CTGGACTGGA TGGTCAGCGG TCGCGTCTTC
GGCGCCGACG AGGCGCTCGC CGCCGGACTG GTCCACAGCG TGCACGAGCC GGACGCGTTA
CTCGACTCGG CGTACACGCT GGCGGCCGAG CTCGTCTCCA CCACCGCGCC GGTGTCGGTG
GCCGTCACCC GGCAACTGCT GTATCGGATG TCTGCTGTGG ACTCCCCGAT TCCGGTCCAC
GCCCTGAACT CCCGCTTGAT CGGCAGCGTT CCGAACAACC CGGACGCCGT CGAGGGGGTA
CTGTCCTTCC TGCAGAAGCG TCCGCCGAAC TTCACCCTGC GCGTGCCGGA CGACCTGCCC
GACTTCCTGC CCTGGGTCCG AAAGGACGAC GCATGA
 
Protein sequence
MANHVDDGDG TDYTQITYRV ADRIATITLN RPEARNGYTV TMADELTDAL TRADHDHDVR 
VVVLTANGRD FCVGADLSQG GFDFDADTGP DAAWQEPAGR VSRRMFASNK PIIAALHGAA
IGGGITITLA ADYRLAATDA RFGFVFVRRG IYPEGASAWF LPRLVGMGRA LDWMVSGRVF
GADEALAAGL VHSVHEPDAL LDSAYTLAAE LVSTTAPVSV AVTRQLLYRM SAVDSPIPVH
ALNSRLIGSV PNNPDAVEGV LSFLQKRPPN FTLRVPDDLP DFLPWVRKDD A