Gene Svir_16380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16380 
Symbol 
ID8386970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1685093 
End bp1685551 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID644975714 
ProductPeroxiredoxin 
Protein accessionYP_003133498 
Protein GI257055666 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.252434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.829786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA AGGACCGCGC ACCGGATTTC ACCCTCCCCG ACGACGACGG CGAGCCGCGA 
CGGCTATCCG AACTCCTGCG GTCCGGGCCT GTCGTGTTGT TCTTCTATCC CGCGGCCATG
ACGCCCGGCT GCACCGCAGA GACATGCCAC TTCCGGGATC TGGCCTCGGA GTTCGCGGAA
CTCGGCGCGC AGCCGGTGGG CGTCAGCCCG GACCCTGTGG ACAGACAGCG CCACTTCTCC
GAGGCCCACG GGATCGGCTT CCCACTGCTG TCGGACGTCG ACGGCACCGT GGCGGCACAG
TTCGGGGTGC GCCGTGGCTT CGGCCCGTTG CGCACCAAAC GGCATACGTT CGTGATCGAC
ACCGATCGCA CGATCCTCGC CGTCATCCGC AGCGAGTTCC GCATGTCCGT CCACGCCGAC
AAGGCACTGG ACGTGCTGCG TGCCCGGAAG GGAGCCTGA
 
Protein sequence
MKQKDRAPDF TLPDDDGEPR RLSELLRSGP VVLFFYPAAM TPGCTAETCH FRDLASEFAE 
LGAQPVGVSP DPVDRQRHFS EAHGIGFPLL SDVDGTVAAQ FGVRRGFGPL RTKRHTFVID
TDRTILAVIR SEFRMSVHAD KALDVLRARK GA