Gene Svir_16150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16150 
Symbol 
ID8386948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1661635 
End bp1662402 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID644975693 
ProductIron-regulated ABC transporter ATPase subunit SufC 
Protein accessionYP_003133477 
Protein GI257055645 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TGGAAATCAA GGATCTGCGC GCCGACGTCG TCACCGACGA GGGCAGCAAG 
GAGATCCTCA CCGGCGTCAA CCTGACGATC CGTTCGGGTG AGATCCACGC CCTCATGGGG
CCGAACGGGT CCGGCAAGTC GACTCTGTCG TACGCCATCG CCGGACACCC CAAGTACGAG
GTGACCTCCG GCGAGGTCCT GCTGGACGGT GAGAACATCC TCGAGCTTGA GGTGGACGAG
CGCGCCCGGG CGGGGCTGTT CCTCGCGATG CAGTACCCGG TCGAGGTGCC CGGGGTGTCG
ATGTCGAACT TCCTGCGCTC GGCGGCCACC GCGGTGCGCG GTGAGGCCCC GAAGCTGCGG
CACTGGGTCA AGGAAGTCAA GGACGAGATG GCCAAGCTCG GCATCGCCCC GGAATTCGCC
GAGCGCAGCG TGAACGAGGG CTTCTCGGGC GGCGAGAAGA AGCGGCACGA GATCCTGCAG
ATGGCGCTGC TCAAGCCGAA GATCGCCGTC CTGGACGAGA CCGACTCCGG CCTCGACGTC
GACGCCCTGC GCGTGGTGTC GCAGGCGGTG AACGACTACA AGGCGAACCA CGAGGTCGGC
ATCATGCTGA TCACACACTA CACGCGCATC CTCGAGCACA TCCAGCCGGA CTTCGTGCAC
GTGTTCGCCG GCGGCAAGAT CGTCGAGTCC GGCGGTAAGG AGCTGGCCGA GGACCTGGAG
AAGAACGGCT ACGTCAAGTA CACCGGGAAG GCGGAGGCTG CGGTCTGA
 
Protein sequence
MATLEIKDLR ADVVTDEGSK EILTGVNLTI RSGEIHALMG PNGSGKSTLS YAIAGHPKYE 
VTSGEVLLDG ENILELEVDE RARAGLFLAM QYPVEVPGVS MSNFLRSAAT AVRGEAPKLR
HWVKEVKDEM AKLGIAPEFA ERSVNEGFSG GEKKRHEILQ MALLKPKIAV LDETDSGLDV
DALRVVSQAV NDYKANHEVG IMLITHYTRI LEHIQPDFVH VFAGGKIVES GGKELAEDLE
KNGYVKYTGK AEAAV