| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16000 |
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| Symbol | |
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| ID | 8386933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1644238 |
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| End bp | 1646679 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975678 |
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| Product | DNA/RNA helicase, superfamily I |
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| Protein accession | YP_003133462 |
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| Protein GI | 257055630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTCG ATCGCAAGAC GACGTTCGAC AGCAAAACCG CAGAACAGAC CCGGCCGGGT
TCGGCCGGTA CGTCGGCGTC CGGCAAGTCC GCCGACATCG CCGCTGAGCA GGCGTATGTG
TCGACGCTCT ACGACCGGCT CGACGCCGAA CGCGAACTCG TCGAGCGCCG ACTCACCGAA
GCTTTGCGCA GCCCTGGGGA AACACCGCAG GCCGCGGCGG AACGTGAGGC CGCCAGCGCG
GCTCACAGTG AACGGCTGGC TCAGCTCAAA GCGGTGGAGC AGGGGCTGTG TTTCGGCCGG
CTCGACTTCG TGGACGGCCA TGACGGGGAC TCCCCGATCT ACATCGGGCG CCTGGGCCTG
TTCGACGAGG ACGACGACTA CCGACCGTTG CTGGTGGACT GGCGTGCGCC CGTAGCCCGG
CCGTTCTACC TCGCCACGGC CGCATCCCCA CAGGGAGTGC GGCGCCGCAG GCACATCCGC
ACGTTGAGCC GGCGAGTGGT CGGATTGGAC GACGAGGTGC TGGATCTCAG TGCGGACGAG
CACAGCAACC ACCTCGGTCT GGCGGGCGAG GCCGCGCTCC TGGCCGCGCT CGAACGTCGG
CGCACCGGTG AGATGTCCGA CATCGTCGCG ACCATCCAGG CCGAGCAGGA CCGCATCATC
CGCGCCGAGC TGCCCGGCGT GCTCGTCGTG CAGGGAGGTC CCGGCACCGG TAAGACCGCC
GTCGCTTTGC ACCGGGCCGC CTACCTGCTC TACACGTATC GGCGGCAGCT GACCACACGT
GGTGTGCTCG TCGTGGGACC CAACAGCACG TTCCTGCGCT ACATCGGACA GGTGCTGCCG
TCCCTGGGGG AGACCGGTGT GTTGCTCGCC ACCATCGGTG AGCTGTTCCC CGGACTGTCC
GCCACGGGCG TCGACACGCC GGAGGCGGCC GAGGTCAAAG GCCGCATCAC GATGGCGGAC
GTCCTCGCCC AGGCCGTCCG GGATCGGCAG ATCGTGCCCG AGGACACCTG GGAGGTGACC
GTCGAGGACG GGGATGTGCT GGTCATCGAC CGCCATATGT GCGAGCGCGC CAGGGCGAAG
GCGCGAGCCA CACTGCGCCC CCACAACCTC GCGAGGCGGG TGTTCGTGGA CCAGCTGCTC
GATGCGTTGG CCGAACAGGT GGCCCAGCGG CTGGAGTCGA ACGTGCTCGA TGACCTGCCC
GAGATCCCGT TGACGGAGGA CGAGGAGGAC AGCGGGCCGA TGCTCGACAC CCGCGACCTC
GCCACGATCC GCCAGGAGTT GGCCGAGGAC ACGCACGTGC AGGCCGCCCT GCAGGAGCTG
TGGCCCAAGC TCACTCCGCA GGAGCTGCTC AGCGACCTGC TCACCTCGGA GGAGCGGCTG
GCCTCGGCCG CGGACGGGTT GCTGGACGAG GCGGAGTGGA GGGCCCTGCT GCGTCGGCCC
GGATCCCTCT GGACGCCTGC GGACGTGCCT TTGCTGGACG AACTGGCCGA GCTCCTCGGT
GAGGACGACA CCGAGGCCCG TGCCCGCAGG GAGCGGCAGC GCCGGGAGGA GCGCGCCTAC
GCCGAGGGTG TGCTCCACGT GTTGGAACAG GACGACGAGA TCATCGACGA GGAGGTCGTG
CGAGTGCGCG ACGTCCTCGA CGCGGAACTG CTGGCCGAAC GGCAGGAGGC CAGCAGCGGT
CTCAGTGCCG CTCAGCGCGC GGCGTTGGAC CGGTCGTGGA CGTTCGGGCA CGTCATCGTC
GACGAGGCGC AGGAGCTGTC GGAGATGGAC TGGCGGCTGC TGATGCGCCG GTGTCCGACT
CGGTCGATGA CCCTGGTGGG GGACGTGTCT CAGACGAGTT CACCCGCCGG TACGTCGTCG
TGGGAGAACG TGCTGCGCCC GTATGTCGGC GATCGCTGGC GATTGCGGGA ACTCACGGTG
AATTACCGCA CACCCGCCGA GATCATGGAG TTGGCCTCGG CCGTGCTCGC CGACATCGAC
CCCGAGCTAC CGGCGCCCAC GTCCGTGCGG GAGACGGGAG TCGCCCCGTG GCAGCGTTCC
ACGAGCCCGG ACGACGTCGC CGCCGATGTC CGTCGATGGG TGGAGGAGGA GCTGGCGGCG
CTGGACCGCG AGCGTGGTGG TGGCACCCTG GCCGTGCTGT GCCCGGACTC CCTGGAAGGA
AGGTTGGCGG CCGAACTGGC CGAAACACGT GACGCTGCGG GATCCGACGA CACCGATGAC
AATCCCAGAG TGTCGGTACT CACAGTGGAC AGGGCCAAGG GGTTGGAGTT CGATGTCGTG
ATCGTGGTCG CACCTCACGA GATCGCGACC GCTTCGCCAC GGGGGAAGAA CGACCTGTAC
GTGGCGCTCA CACGGGCCAC CCAACGGCTC GGCGTCGTCC ACACCGCACC ACCGTTGCCC
GCTCTCTCAG GCGAGCAAAA GTCCGCGTCG ACGTCCGGAT AA
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| Protein sequence | MPFDRKTTFD SKTAEQTRPG SAGTSASGKS ADIAAEQAYV STLYDRLDAE RELVERRLTE
ALRSPGETPQ AAAEREAASA AHSERLAQLK AVEQGLCFGR LDFVDGHDGD SPIYIGRLGL
FDEDDDYRPL LVDWRAPVAR PFYLATAASP QGVRRRRHIR TLSRRVVGLD DEVLDLSADE
HSNHLGLAGE AALLAALERR RTGEMSDIVA TIQAEQDRII RAELPGVLVV QGGPGTGKTA
VALHRAAYLL YTYRRQLTTR GVLVVGPNST FLRYIGQVLP SLGETGVLLA TIGELFPGLS
ATGVDTPEAA EVKGRITMAD VLAQAVRDRQ IVPEDTWEVT VEDGDVLVID RHMCERARAK
ARATLRPHNL ARRVFVDQLL DALAEQVAQR LESNVLDDLP EIPLTEDEED SGPMLDTRDL
ATIRQELAED THVQAALQEL WPKLTPQELL SDLLTSEERL ASAADGLLDE AEWRALLRRP
GSLWTPADVP LLDELAELLG EDDTEARARR ERQRREERAY AEGVLHVLEQ DDEIIDEEVV
RVRDVLDAEL LAERQEASSG LSAAQRAALD RSWTFGHVIV DEAQELSEMD WRLLMRRCPT
RSMTLVGDVS QTSSPAGTSS WENVLRPYVG DRWRLRELTV NYRTPAEIME LASAVLADID
PELPAPTSVR ETGVAPWQRS TSPDDVAADV RRWVEEELAA LDRERGGGTL AVLCPDSLEG
RLAAELAETR DAAGSDDTDD NPRVSVLTVD RAKGLEFDVV IVVAPHEIAT ASPRGKNDLY
VALTRATQRL GVVHTAPPLP ALSGEQKSAS TSG
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