Gene Svir_15540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15540 
Symbol 
ID8386887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1595533 
End bp1596114 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID644975632 
Productpyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
Protein accessionYP_003133416 
Protein GI257055584 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCAC GATCGCGTGG CGCGACCGGA TCGGCCGCTG AGCGCGAGCT GCTCTCGGCC 
GGTGACGTTG CGCGCACTAT CGCCCGAATG GCCCATCAGG TCATCGAAAA AACCGCGCTC
GGTGCTGAGG GCATGCCCCC ACCCGTGTTG CTGGGCATCC CGACGCGAGG AGCGCCTCTC
GCGGCTCGGT TGAGCGCGAG GATCACCGAG TTCTCCGGTG TGGCGGTGCC CAAGGGCACA
CTCGATGTCA CGTTGTACCG GGACGATCTC CGCCGTCGTC CCACTCGACC CCTCGCCCAG
ACCCAGCTTC CGGACTCCGG CATCGACGAC CGGGTCGTCG TGCTCGTCGA CGACGTCCTG
TACTCCGGCC GGACCATCCG AGCCGCGCTG GACGCACTGC GTGATCACGG GCGACCTCGG
GCCGTGCAGT TGGCGGTGCT CATCGACCGT GGCCATCGGG AGCTGCCCAT CCGCGCCGAC
TACGTGGGCA AGAACGTCCC GACCTCGCGG TCCGAGGACG TCTCGGTGTT GTTGGACGAG
GTCGACGGCC GCGACGCCGT ATTGCTCAGG GAGCGTCGAT GA
 
Protein sequence
MASRSRGATG SAAERELLSA GDVARTIARM AHQVIEKTAL GAEGMPPPVL LGIPTRGAPL 
AARLSARITE FSGVAVPKGT LDVTLYRDDL RRRPTRPLAQ TQLPDSGIDD RVVVLVDDVL
YSGRTIRAAL DALRDHGRPR AVQLAVLIDR GHRELPIRAD YVGKNVPTSR SEDVSVLLDE
VDGRDAVLLR ERR