Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15190 |
Symbol | |
ID | 8386852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1561057 |
End bp | 1562250 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975597 |
Product | predicted multitransmembrane protein |
Protein accession | YP_003133381 |
Protein GI | 257055549 |
COG category | [S] Function unknown |
COG ID | [COG5438] Predicted multitransmembrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0772315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCG CGCTCCTGGC CCCGGTCGCG ATGGCCACGC TGGTGGCCGT CGTCGTGCTG TATCCGTGGA ACGGCGCTCA GCTCCCCCGA TCCGTGGGAA CCCCCGTCAA CGGCGTGGTC ACGGCCGCGA CGTCCGGCCC CTGCCTGGCA CCGGGGCAGG TGCAGGTCGG CGCCCCCAAC CCGGACGACA AACGGTGTCT CATGGTCGAG ATGGCCTTGA GCGACGGTCC CGCGCAGGGT TCGACGATCA CCAAATCCGT ACCACTCGAA CCCACCAGCC CCCGGTTCGC GGTGGGCGAC GAGGTGGTGT TGTCCTACAG CGGCGCCGAC CCCACCGACT CCACCTCGTA CCAACTGCAG GACTTCCAGC GCGGGATGCC GCTGCTCCTG CTCGGCGCTT TGTTCGCGGG TGCGGTCCTG CTGCTCGGTC GCTGGCAGGG CCTGGCCTCG CTGGTGGCAT TGGGGATCAG TTTCGCCGTC ATCACCCTGT TCGTGCTCCC GGCGATCCTC GCGGGACGTG ACCCGCTGCT GGTCGCCATC GCGGGAGCCG GGCTGATCAT GTTCGTGGCG TTGTATCTCA CCCACGGTCT GTCCGCCCGC ACCTCGGTCG CGGTGCTGGG GACGATGGTC AGTCTCGCCT TGATCGGGAC GTTGTCGGCG ATCTTCTCCG CGATGGCGAA GCTCACCGGA CTGGACAGTG ACACGAGCAC GCTCATCGGA TCGCTGGGGC ACCCCATCGA CGCCCGTGGA CTTCTGCTGG CCGGTGTGGT GATCGGTGCC CTCGGTGTCC TCGACGACGT GACGGTCACC CAGGCGAGCT CGGTATGGGA ATTACGGCGT GCCAACCCCT CACTGGATTG GCGCGGTCTG TACACGGCCG GGTTGCGCAT CGGCAGGGCT CACGTCGGAT CGGCCGTCAA CACGCTCGTG TTGGCCTACG CGGGAACGGC CCTCCCCCTG CTGTTGTTGT CCGCGATGGC GGACGTGGGG TTGTCGCCGA TCCTCCAATC CCAGGACGTG GCCCAGGAGA TCGTGCGGAC GCTGGCGGGC AGCATCGGCA TCGTGGCGGC CGTGCCCCTG ACCACGTTGC TGGCCGCCCT CATCGCGGTG CGCGATGACG CGCCCCCTTC GCAGCAGCCC GCGCGGAACC GGAAGGACCG GGTCAGTCGT CGAGGGTCGC CACGAAACGA TTGA
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Protein sequence | MLLALLAPVA MATLVAVVVL YPWNGAQLPR SVGTPVNGVV TAATSGPCLA PGQVQVGAPN PDDKRCLMVE MALSDGPAQG STITKSVPLE PTSPRFAVGD EVVLSYSGAD PTDSTSYQLQ DFQRGMPLLL LGALFAGAVL LLGRWQGLAS LVALGISFAV ITLFVLPAIL AGRDPLLVAI AGAGLIMFVA LYLTHGLSAR TSVAVLGTMV SLALIGTLSA IFSAMAKLTG LDSDTSTLIG SLGHPIDARG LLLAGVVIGA LGVLDDVTVT QASSVWELRR ANPSLDWRGL YTAGLRIGRA HVGSAVNTLV LAYAGTALPL LLLSAMADVG LSPILQSQDV AQEIVRTLAG SIGIVAAVPL TTLLAALIAV RDDAPPSQQP ARNRKDRVSR RGSPRND
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