Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15140 |
Symbol | |
ID | 8386847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1557107 |
End bp | 1557880 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975592 |
Product | enoyl-CoA hydratase/carnithine racemase |
Protein accession | YP_003133376 |
Protein GI | 257055544 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.144645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.188843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG GCATCGACTT CCACATCGAC GGTGAGGTCG CCAGGCTCAC CTTCAACAGG CCGGACAAGA TGAACGCCAT CACCCACGAC ATGTGGTCGG CGATCCCCGA CGTGGTCGCT GCCGTGGAGG GCGATCCGGG GGCGAAGGTG CTCGTGGTGA CCGGTGCGGG CCCGCATTTC TCCGCGGGTG CGGACATCGG TGAGTTCCGC GCGTTGCGGT CCACGGCGGA GGGGGCGGCG GTCTACGACA AGGCGGTGAC GGCCGCCGTG CAGGCGTTGA GCTCCCTGCG CAAGCCCAGC GTGGCGATGG TCCACGGCAA CTGCATCGGC GGCGGTTGCC AATTGGCGGT GGCCTGTGAT TTCCGGTTCG CGGCGGCGGA CGCGCGGTTC GGCATCACCC CGGCCAAGCT CGGCATCGTC TACGACTTTC TTTCCACCCG GCAGCTGGTC GCGCTCATCG GTCCCGCGAA CGCACGCTAC CTGCTGCTGT CGGCGCAGCT TGTCGACGCC GAGAAGGCGC GGCAACTGGG ACTGGTCAAC GAGGTCGTCG AGCCGAGCCG GCTGGAGGAG GCCACGACGG AGTTCGTCCG GACCCTGTGC TCCCGCTCGC AGACGGCGAT CCGCGGTATG AACGAGATCA TCGAGCGTAT TCTGTCGGGC CAGCGGGAGT CCGACGTCGA GATCGAACGC ATTCGCAGCG ACGCGGTGCA CAGCGCCGAC TACGCGGAGG GGGTCGCCGC GTTCCTGGAA CGTCGGCCAC CTCGTTTCGA CTGA
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Protein sequence | MNDGIDFHID GEVARLTFNR PDKMNAITHD MWSAIPDVVA AVEGDPGAKV LVVTGAGPHF SAGADIGEFR ALRSTAEGAA VYDKAVTAAV QALSSLRKPS VAMVHGNCIG GGCQLAVACD FRFAAADARF GITPAKLGIV YDFLSTRQLV ALIGPANARY LLLSAQLVDA EKARQLGLVN EVVEPSRLEE ATTEFVRTLC SRSQTAIRGM NEIIERILSG QRESDVEIER IRSDAVHSAD YAEGVAAFLE RRPPRFD
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