Gene Svir_15140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15140 
Symbol 
ID8386847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1557107 
End bp1557880 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID644975592 
Productenoyl-CoA hydratase/carnithine racemase 
Protein accessionYP_003133376 
Protein GI257055544 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.144645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.188843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG GCATCGACTT CCACATCGAC GGTGAGGTCG CCAGGCTCAC CTTCAACAGG 
CCGGACAAGA TGAACGCCAT CACCCACGAC ATGTGGTCGG CGATCCCCGA CGTGGTCGCT
GCCGTGGAGG GCGATCCGGG GGCGAAGGTG CTCGTGGTGA CCGGTGCGGG CCCGCATTTC
TCCGCGGGTG CGGACATCGG TGAGTTCCGC GCGTTGCGGT CCACGGCGGA GGGGGCGGCG
GTCTACGACA AGGCGGTGAC GGCCGCCGTG CAGGCGTTGA GCTCCCTGCG CAAGCCCAGC
GTGGCGATGG TCCACGGCAA CTGCATCGGC GGCGGTTGCC AATTGGCGGT GGCCTGTGAT
TTCCGGTTCG CGGCGGCGGA CGCGCGGTTC GGCATCACCC CGGCCAAGCT CGGCATCGTC
TACGACTTTC TTTCCACCCG GCAGCTGGTC GCGCTCATCG GTCCCGCGAA CGCACGCTAC
CTGCTGCTGT CGGCGCAGCT TGTCGACGCC GAGAAGGCGC GGCAACTGGG ACTGGTCAAC
GAGGTCGTCG AGCCGAGCCG GCTGGAGGAG GCCACGACGG AGTTCGTCCG GACCCTGTGC
TCCCGCTCGC AGACGGCGAT CCGCGGTATG AACGAGATCA TCGAGCGTAT TCTGTCGGGC
CAGCGGGAGT CCGACGTCGA GATCGAACGC ATTCGCAGCG ACGCGGTGCA CAGCGCCGAC
TACGCGGAGG GGGTCGCCGC GTTCCTGGAA CGTCGGCCAC CTCGTTTCGA CTGA
 
Protein sequence
MNDGIDFHID GEVARLTFNR PDKMNAITHD MWSAIPDVVA AVEGDPGAKV LVVTGAGPHF 
SAGADIGEFR ALRSTAEGAA VYDKAVTAAV QALSSLRKPS VAMVHGNCIG GGCQLAVACD
FRFAAADARF GITPAKLGIV YDFLSTRQLV ALIGPANARY LLLSAQLVDA EKARQLGLVN
EVVEPSRLEE ATTEFVRTLC SRSQTAIRGM NEIIERILSG QRESDVEIER IRSDAVHSAD
YAEGVAAFLE RRPPRFD