Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14700 |
Symbol | |
ID | 8386803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1518162 |
End bp | 1519523 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644975549 |
Product | predicted Zn-dependent peptidase |
Protein accession | YP_003133337 |
Protein GI | 257055505 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.2427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAC AAATTGCCGG TCACCTGCAA CCGATCGGTT CCACCCGAAC GTTGGACTCG GGAATGGATT CCGGTGTCGT CAAGCGCACC GTGCTGCCCG GCGGACTACG CGTGATCACC GAGTCGATTT CGGGTGTGAG ATCCGCGACG GTGGGTCTGT GGGTCGGGGT CGGTTCGCGG GACGAACGGC CCCACCTCGC GGGCGCGGCT CACTATCTCG AACATCTGCT GTTCAAAGGC ACCGCGCGCC GCAGCGCCGC GCAGATCGCG GAAGAGATCG ACGCGGTCGG TGGTGAGATG AACGCTTTCA CCGCCAAGGA GCACACGTGT TTCTACGCCC AGGTGCTCGA CGACGACCTG CCGTTGGCGG TGGATCTCAT TACCGACGTC GTGTTCGAAG CGCTGTGTTC GGACGCCGAT GTGGACATCG AACGTGGGGT GGTGCTCGAA GAGATCGCCA TGCGCGATGA CGATCCCGAG GACCTGTTGC ACGAGATGTT CGTGGAAACG GTCATGCCGA ATCATCCACT CGGCCGTTCG ATCCTGGGCA CTGAACAGTC CATCACGATG ATGACCCCGT CGGCGTTGCG TAGTTTCTAC CGCAGGCGTT ATCGACTGCA GCGGATGGTG CTGGCGGTGG CGGGCAACGT CGAACACCGC GCGGTGGTGC GCATGGTGGA ATCGGCGCTG CGCGGTCGAC TGTCCGGTTC GGACACACCA CGACCGCCGA GGGGCGGGCA GGCGCGGTTC GGTCGTTCGG TACGGCCCGT GCTGTACAAA CACGACACCG AACAGACGCA CCTCATGCTG GGTGTGCGGA CTCCGGGCCG ACACGATGAG CGTCGGTACT CGCTGGCGGT GCTCAACACC GTGCTCGGTG GCGGGATGAG TTCACGCCTG TTCCAGGAGG TCCGAGAGCG GCGTGGGTTG GCCTACCAGG TGTACTCGTC CGTGACGTCC TACGCCGACG CCGGCCACTT CGACATCTAC GTGGGCTGTC AACCCGATCG GCTCGGTGAG GTCGCCGGCG TGGTGGGCGG GATGCTCGCC GATCTCGTCG AACACGGGGT GACCGAAGCC GAGGTCACCA GGGCGAAGGG CCAGCTGCGG GGCGGACTCG TCCTGGGTTT GGAGGACACC GCCTCCCGCA TGTTCCGGCT CGGTGAGAAC GAACTCCATT ACGGCCATTA CCGCAGCGTG AGTGAGACAG TGGAGCGTAT CGACGCTGTC ACGACGGAGG ACGTGACGGC ACTGGCTCGC GCATTGCTGC GACGGCCCGG TGGCCGGTCG GCGGTCGCCG TGGTCGGGCC GTACGCTCAC ACCGACGACC TTCCCGAGGA ACTGCACGAG GTGATGGCAT GA
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Protein sequence | MARQIAGHLQ PIGSTRTLDS GMDSGVVKRT VLPGGLRVIT ESISGVRSAT VGLWVGVGSR DERPHLAGAA HYLEHLLFKG TARRSAAQIA EEIDAVGGEM NAFTAKEHTC FYAQVLDDDL PLAVDLITDV VFEALCSDAD VDIERGVVLE EIAMRDDDPE DLLHEMFVET VMPNHPLGRS ILGTEQSITM MTPSALRSFY RRRYRLQRMV LAVAGNVEHR AVVRMVESAL RGRLSGSDTP RPPRGGQARF GRSVRPVLYK HDTEQTHLML GVRTPGRHDE RRYSLAVLNT VLGGGMSSRL FQEVRERRGL AYQVYSSVTS YADAGHFDIY VGCQPDRLGE VAGVVGGMLA DLVEHGVTEA EVTRAKGQLR GGLVLGLEDT ASRMFRLGEN ELHYGHYRSV SETVERIDAV TTEDVTALAR ALLRRPGGRS AVAVVGPYAH TDDLPEELHE VMA
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