Gene Svir_14230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14230 
Symbol 
ID8386756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1467003 
End bp1468304 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID644975502 
Producthypothetical protein 
Protein accessionYP_003133290 
Protein GI257055458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.413871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG AATTTTGGGA TCATTCCGAG ATCCAGCAGG CTGCACGAGA GCGGCACATC 
GGTCGTTTGC TCCGCGCGTA TCGCACGCTC CAGCGGCCGA GGATGACGCA GTTACAGTTG
GCCGGCTGGC TGGGGATCGA CCAGTCGAAC CTGTCCCGAC ACGAACGGGC GGCTCGACCC
ACGGTCGACC TGGACAAGTT GATGCAATGG GCGAGCATCC TGCGGATTCC GCAACGTCTT
TTGTGGTTCC AGCTCCATCC GACCCACACA TCTGAGCCGG CCCCGGCTTC GCCGACGCTC
GCCACCGTCG AGGAGAGTGG AGACGTTGAC GTGCACCGAC GACAGTTCCT CCGTGCTTCG
GGGATGACAG CGCTCGGCAT GGTCTGCAGC GGTACCGCGC AGGCCGTTCC CAGCGGCTCG
ACGGTGGAGG AGATCCGCCG TATGACGGCG GGGTTCCGCG CGCAGGACAA CAGTTTCGGC
GGAAGCTACG GTCGCAGTGC GTTGGCGGCC TATTTCAGTC GCACGGTGGA ACCGTTGTTG
ACTTCCCGGG CGAAGCCGCC CCTGCTCGTC GCCGCCGCCG AAATGCAACA GGTCGCAGGG
TGGATGGCCT ATGACGTCGG GCAACCCGAG ATCGGGCGAC GACATCTTCG CGAGGCACTG
CGACTCTGTC AACGGGCGGG CGAGGAAGCG CTCGCCGCGG AGATGCTCGC CGGCATGTCG
CACCAAGCGG CGTTCCTGGG GGCCGGTGAC TCGGCCGTCG ACCTCGCCTT GGCGGCCCAG
CAGATCGCCG GACGTGTGCA CCTGCCCGCC CTGGCCGCAG AGATCAACGT GCTGGAGGCC
CATGGGTACG CCATCAAAGG GGACAGGGCC GAATGTCTGG CGGCTTTGCA CCACAGTGAA
CAGGCGTTCG AGCACGCCGA CGGTGATCGA CCGGACTGGT TGCGCTACTT CGACCGTTCC
TACATGGCCG CGAAGACCGC ACACGTCCTG CGGGACCTCG GGGCTTCGGC GGAAGCCGAG
GCGTATGCGC GGGAATCCCT GCAGATGGCC GAGGGATACG AACGTGGGCG GCTTTTCAAC
ACGGCTCTGC TCGCCTCGAT CCTGGCCGAT CAACGGCGGG TGGAGGAAGC CTGCGCCGAG
GGCGCTCGGG CGGTGTCGAT GCTCCACCGC GTCCGTTCTG TGCGCGCTCT CGCCTACCTG
TCCGATTTGG CGCGCCGCCT CGCCCCGTTC GCCCGCACCA CGTCGGTGAA GCACCTGTAC
GACCGGTTCC ACAGTGTCGG GGTCGTCACC CCGCGAATGT AG
 
Protein sequence
MPDEFWDHSE IQQAARERHI GRLLRAYRTL QRPRMTQLQL AGWLGIDQSN LSRHERAARP 
TVDLDKLMQW ASILRIPQRL LWFQLHPTHT SEPAPASPTL ATVEESGDVD VHRRQFLRAS
GMTALGMVCS GTAQAVPSGS TVEEIRRMTA GFRAQDNSFG GSYGRSALAA YFSRTVEPLL
TSRAKPPLLV AAAEMQQVAG WMAYDVGQPE IGRRHLREAL RLCQRAGEEA LAAEMLAGMS
HQAAFLGAGD SAVDLALAAQ QIAGRVHLPA LAAEINVLEA HGYAIKGDRA ECLAALHHSE
QAFEHADGDR PDWLRYFDRS YMAAKTAHVL RDLGASAEAE AYARESLQMA EGYERGRLFN
TALLASILAD QRRVEEACAE GARAVSMLHR VRSVRALAYL SDLARRLAPF ARTTSVKHLY
DRFHSVGVVT PRM