Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_13600 |
Symbol | |
ID | 8386696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1402528 |
End bp | 1403901 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975444 |
Product | CBS domain-containing protein |
Protein accession | YP_003133234 |
Protein GI | 257055402 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCTT CGGCCACCGT CTTGGTCGTG GCAGTCCTGC TCGTGCTGTT CGGTGGGGTC TTCGCGGCGG CTGATGCGGC CATCAGCACG GCATCGGTCG CGCGGGCCGA GGGCCTGGAG CGGATGGGGC GGACCGGGGC TCGGCAGCTT CTTCTGGTAC TCCGCGACCG CACCCGGCAC ATGAACCTGC TGTTGCTGTT GCGGATGGGC TGCGAGCTGA CCGCCACCGT GCTCGCCACC GTGGTGGCGT TGCGTTGGAT CGAGCCCGAA TGGCTCGCGC TGTTGCTCGT CGCCGTCGTC ATGGCGCTGG TCAGCTACGT GCTGGTCGGT GTCGGCCCCC GTACCGTGGG TAGGCAGCAC CCGTATCGGG TCGGCCTCAT CGTGGCGGGG CCGGTACGGG TGTTGGGGAC CGTGCTCGGA CCGCTGAGCA GGCTGCTCAT CGTGCTCGGC AACGCCATCA CGCCGGGTGG AGGGTTTCGG GAAGGTCCGT TCACGAGCGA GGCGGAGCTT CGGGAACTCG TCGATCTCGC GGAGAAACGC GGTGTCGTGG GCACCGACGA GCGCGAGATG ATCCATTCGG TGTTCGAGCT CGGGGACACG GTGGCGCGTG AGGTGATGGT GCCGCGCACC GAGATCGTGT GGATCGAGCA GAACAAGACC GTGCGGCAGG CGTTGGCTCT GTCCATGCGG ACCGGATTCA CCCGCATTCC CGTGATCGGT GAGTCGGTGG ACGAGATCGT CGGTGTGGTG AACCTCAAGG ACCTCGTGCG GGCGGCCATC GCCGAGGACG GCACCACCCG TGAGGTCAGG GAGTTGATGA TCCCCGCCGA TTTCGTGCCC GACTCCAAAC GCCTCGACAG CCTGCTGAAG CACATGCAGG TCTCCCGTCA CCACATGGTC ATCGCTGTGG ACGAGTACGG AGGTACGGCC GGGCTCGTCA CCATCGAGGA CATCCTGGAA GAGATCGTCG GTGAGATCAC CGACGAATCC GACACCGACG AACGGCCACC CGTCGAATAC GTCGACGACC AGGTGGTGCG GGTCTCCTCG CGATTGGGGA TCGACGACCT GGGTGAGTTG TTCGACGTCG ACCTGTCGGA ACACGACGTG GAGACGGTCG GCGGTCTCCT CGCCCAGCGG CTGGGCCGTG TCCCGTTGCC CGGCGCGGAG GCCGAGATCA ACGGACTGCG GCTACGCGCG GAGGGTGGCA AGGACCGTCG GGGCCGCATG AGGATCACGA CCGTGGTCGT GCGGGCGGCG GACGGGCGCC CCATCGGCCC CGGTACCCCC GATACCGCCG AGAACCGTAG TGACCGCGGC GATCGCAACG ACCGTGACGG TCGCAACGAC CGTGAGACCG GGACAGGAGA GTGA
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Protein sequence | MTSSATVLVV AVLLVLFGGV FAAADAAIST ASVARAEGLE RMGRTGARQL LLVLRDRTRH MNLLLLLRMG CELTATVLAT VVALRWIEPE WLALLLVAVV MALVSYVLVG VGPRTVGRQH PYRVGLIVAG PVRVLGTVLG PLSRLLIVLG NAITPGGGFR EGPFTSEAEL RELVDLAEKR GVVGTDEREM IHSVFELGDT VAREVMVPRT EIVWIEQNKT VRQALALSMR TGFTRIPVIG ESVDEIVGVV NLKDLVRAAI AEDGTTREVR ELMIPADFVP DSKRLDSLLK HMQVSRHHMV IAVDEYGGTA GLVTIEDILE EIVGEITDES DTDERPPVEY VDDQVVRVSS RLGIDDLGEL FDVDLSEHDV ETVGGLLAQR LGRVPLPGAE AEINGLRLRA EGGKDRRGRM RITTVVVRAA DGRPIGPGTP DTAENRSDRG DRNDRDGRND RETGTGE
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