| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13380 |
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| Symbol | |
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| ID | 8386674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1376808 |
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| End bp | 1378082 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975422 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003133212 |
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| Protein GI | 257055380 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.223533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCG GCACGGCTGG GGCGGACATC GAGGCACAGC GACACCCTCG CGGCCGCATC
GCGCGTTACG CGCTGGTTCT CGGCGGGCTG ACCGCCTTCG GCCCCCTGTC CGTCGACATG
TACCTACCCG CCCTGCCCGC GATGGCGGAC GATCTGCACT CCAGCGACGC ACAGGTGCAG
CTCACCCTCG CCGTCTTCCT TCTCGGCCTC GGCGTGGGAC AACTGGTCGT GGGCCCACTC
TCCGACGCCT TCGGCAGACG CACACCACTC CTCGTCGGTG TCACGATCTT CACCGCGGCA
TCGGTGGTGG CAGCCCTCAG TCCCACGCTT CCCGTGCTGA TCGCCGCCCG CGCGGCACAG
GCCTTCGGAG CGGCCGCCGG CATGGTGATC GCCCGAGCGG CCGTCCGTGA CCTGTTCTCC
GGTGTCGCGA TGGCACGGTT CTTCTCCACC CTGATGCTGG TCACCGGCGC GGCGCCCATC
CTCGCGCCCG TGCTCGGCGG GCAACTGCTG CGCTGGACCT CCTGGCGTGG GATCTTCGTC
GCCCTCACGG TGTTCGGCGT GACACTGCTC GTCGTCGCGG CTTCCGCGCT CCCGGAAACC
CTGCCGAAGT CGCATCGCCG ATCCGCGCAA CCGCGGGACA TCCTCGGCAC CTACGTCGGA
CTACTGCGCG ACCGCGTGTT CGTCGGGTAC GCGGTCACCA TCGGACTCGC GTTCTCGGTG
ACGTTCGCCT ACATCTCCGG ATCACCGTTC GTCTTCCAAC AGCACTACGG ACTCTCCGCC
TCCGATTACG GGTTCGTGTT CGCGTTGAAC GGGATCGGAC TCGTGCTCGC CGGTCAGCTC
AACGGAAGGC TGGTGAGCCG CTTCGCCCCG AGGACACTCC TCCGCACCGG GCTGACACTG
TCGCTGACCG GGGTGGTCGG CCTCGTGGTG GCCGCAGCGC TACGGGCGGA GTTTCCGATC
CTGCTCCTCC CGCTGTTCGT CACCGTGTCC TCGGTCGGGA TGATCACTCC TAACGCGACG
ACACTCGCCC TGGCCGACCA CCCTCGGTCG GCCGGGTCGG CATCGGCGCT GCTGGGGCTG
GTGCAATTCT TCACCGGCGG CGCCATCTCC CCGCTCGTCG GTCTCCTCGG CGGTGATTCG
GCACTGGGCA TGACCGTGGT CATGGCGGTG GCGGCCGCGG CCGCTTTCAC GACCTTTGCC
GTACTCACCC GGAGACCACA TCGGCACCAG GGCAAACGCA GCGACGAATC CGCCCAAATC
GATCACGTGG GATGA
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| Protein sequence | MTTGTAGADI EAQRHPRGRI ARYALVLGGL TAFGPLSVDM YLPALPAMAD DLHSSDAQVQ
LTLAVFLLGL GVGQLVVGPL SDAFGRRTPL LVGVTIFTAA SVVAALSPTL PVLIAARAAQ
AFGAAAGMVI ARAAVRDLFS GVAMARFFST LMLVTGAAPI LAPVLGGQLL RWTSWRGIFV
ALTVFGVTLL VVAASALPET LPKSHRRSAQ PRDILGTYVG LLRDRVFVGY AVTIGLAFSV
TFAYISGSPF VFQQHYGLSA SDYGFVFALN GIGLVLAGQL NGRLVSRFAP RTLLRTGLTL
SLTGVVGLVV AAALRAEFPI LLLPLFVTVS SVGMITPNAT TLALADHPRS AGSASALLGL
VQFFTGGAIS PLVGLLGGDS ALGMTVVMAV AAAAAFTTFA VLTRRPHRHQ GKRSDESAQI
DHVG
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