Gene Svir_13280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13280 
Symbol 
ID8386664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1364823 
End bp1365449 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID644975412 
Productfructose-2,6-bisphosphatase 
Protein accessionYP_003133202 
Protein GI257055370 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TGATCCTCGT CCGGCACGGG GAGACCATCT GGCACCACGA CAACCGCTAC 
ACCGGCCGCA GTGACGTACC ACTGACCGAG CGGGGCCATC GACAGGCGGA AGCCTTCGCC
CGCTGGGCCG CCACATCCCC ACCGCACGCG CTGTGGGTGT CACCGCTGAG CAGGGCACGG
GACACCGCGG CCCCCATCGC GAAGGCCACC GGCCTGTCGA TGCGGATCGA CGAGCGGCTG
GTGGAGCTCG ACTTCGGCCG GGGGGAAGGG CTCACCGGGG CGGAGATGGA CGAGGCGTTC
CCCGAGGCCC GTAGGGCTTT CGTGGCCGAT CCGGTGGCGA ATCACCTGCC CGGCGGCGAG
GATCCCGTTC ACGCCGCGGA GCGAATGGCC GCCTGTGCCG CCGACATCGT GCGAGAACAT
CCCAACGAGA CGGTGCTCGT GGTCGGTCAC TCCACCGCGC ACCGGTTGTT GTTGTGCCGA
CTGCTTGGAC TTCCCTTGAG CTCCTATCGC CGGGTGTTCC CGGTGTTCCG GAACTGCGCC
GTCACCACGG TCCGTTGGAA CGGCACCGAT CCCGCGGCGC TGATCGAGTA CAACGTCCCA
CCCGACCACC GAGCCGTGGC CGCGTAG
 
Protein sequence
MTDLILVRHG ETIWHHDNRY TGRSDVPLTE RGHRQAEAFA RWAATSPPHA LWVSPLSRAR 
DTAAPIAKAT GLSMRIDERL VELDFGRGEG LTGAEMDEAF PEARRAFVAD PVANHLPGGE
DPVHAAERMA ACAADIVREH PNETVLVVGH STAHRLLLCR LLGLPLSSYR RVFPVFRNCA
VTTVRWNGTD PAALIEYNVP PDHRAVAA