| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13010 |
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| Symbol | |
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| ID | 8386637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1338152 |
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| End bp | 1338898 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644975385 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_003133175 |
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| Protein GI | 257055343 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACGT CAACGGAGTC GGGATTGATC CTGCCGAGGT ATCGACGGGA CCCTGAGGGG
ACACATCCGC CGTTGAACTC GCCGGAATAC CGTTCGACCC AGTTGCGGTA TCCGAAGCAG
CCGTTGGTGT TGTTGCCGCA CAAACTGACC GAGGTGACGG GTCCGTTGTT GGGCTACGGC
CGGGTCGGCG AGTTGGACAA CGACCTCACG CGGCAGCACC CGCAGGAACC CCAGGGGCAG
CGCATCCTGG TGCACGGGCG CCTGCTCGAC GGTGACGGCA AACCGATCCC GAATTCGCTG
ATCGAGATCT GGCAGGCGAA CGCGGGTGGT CGGTATCGGC ACGTGTGGGA CAACTGGCCG
AGTCCGATCG ACCCGAACTT CGACGGTGTG GGCCGTACGA TCACCGACGA CGAGGGCCGG
TACGAGTTCA TCACCATCAA GCCGGGGGCG TATCCGTGGA AGAACCACGA CAACGCCTGG
CGTCCCTCGC ACATCCACTT CTCCGTGTTC GGTACGGCGT TCACCCAGCG GCTCGTCACG
CAGATGTACT TCCCCGACGA TCCGCTGTTC TTCCAGGACC CGATCTTCAA TTCGATTCCG
GACGAGAAGG CGCGGCAGCG GTTGATCTCG TCGTTCGATC TGAGCCGGAC GGTGCCGGAA
TGGGCGTTGG CGTTCCGTTT CGACATCGTG GTGCGAGGCA GGGAAGCGAC GCCGTTCGAA
AACCCGGAGG ACGAAGAGGA CGAGTGA
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| Protein sequence | MSTSTESGLI LPRYRRDPEG THPPLNSPEY RSTQLRYPKQ PLVLLPHKLT EVTGPLLGYG
RVGELDNDLT RQHPQEPQGQ RILVHGRLLD GDGKPIPNSL IEIWQANAGG RYRHVWDNWP
SPIDPNFDGV GRTITDDEGR YEFITIKPGA YPWKNHDNAW RPSHIHFSVF GTAFTQRLVT
QMYFPDDPLF FQDPIFNSIP DEKARQRLIS SFDLSRTVPE WALAFRFDIV VRGREATPFE
NPEDEEDE
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