| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12930 |
|---|
| Symbol | |
|---|
| ID | 8386629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1330655 |
|---|
| End bp | 1331290 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644975377 |
|---|
| Product | uracil-DNA glycosylase, family 4 |
|---|
| Protein accession | YP_003133167 |
|---|
| Protein GI | 257055335 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGGT ACGAGGGCGC GGAGCACTAT CTGCCGCGGG AACGCGCCGT GACGTCCCTG
CGACAGGCCG CGGCGGGCTG TCGGGGCTGT GATCTGTTCA CCGATGCGAC ACAGACCGTG
TTCGGTGAAG GGGCGGATCG TGCCCGGCTG GTCCTGGTGG GCGAGATGCC CGGGGACCGG
GAGGACCGTG AGGGACGACC GTTCGTCGGA CCTTCCGGGA ATCTGCTCGA CCGCGCGTTG
GGGGAGGCGG GGATCGACCG CGACACCGTG TACGTGACCA ATGCCGTGAA ACACTTCCGT
TTCACCCGGG AGGGGAACCG AAGGCGGCGC TTGCACAAGA AGCCGACACG CTCCCAGATC
ACGGCGTGTA AGCCATGGTT GTTGGCGGAA CTCGACGCGG TGCGCCCCGA TGTCGTGGGA
CTGCTCGGCG CCACCGCTGC GCAAGCACTG TTCGACGCGG ACTTCCGGGT CAGTGCCCAC
CGTGGCGAGG TTTTAAAACT GCCCGGATTG GACGATCCAC CTTTGGCCGT CGCGACCGTG
CACCCGTCCG CGGTGTTGCG GGCTCGGGAC AGCGACCGGG AACGCGCGTA CGCGGAGTTC
GTCGCTGATC TGCGGGTGGT CGCGGCGGCA CTGTGA
|
|---|
| Protein sequence | MVRYEGAEHY LPRERAVTSL RQAAAGCRGC DLFTDATQTV FGEGADRARL VLVGEMPGDR
EDREGRPFVG PSGNLLDRAL GEAGIDRDTV YVTNAVKHFR FTREGNRRRR LHKKPTRSQI
TACKPWLLAE LDAVRPDVVG LLGATAAQAL FDADFRVSAH RGEVLKLPGL DDPPLAVATV
HPSAVLRARD SDRERAYAEF VADLRVVAAA L
|
|---|
| |