Gene Svir_12890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12890 
Symbol 
ID8386625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1328519 
End bp1328872 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content63% 
IMG OID644975373 
Productpredicted membrane protein 
Protein accessionYP_003133163 
Protein GI257055331 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC GACGCGACGA AGACGAGGAA GTCGAGCCGG ACTATCGGTT CACTCTCGCC 
AACGAACGCA CCTTCCTGGC GTGGACCCGC ACCTCCTTCG GCCTCATCGC GGGAGGGGTC
GCGGTACACC AGCTACTGCC CAGATTCGCC ACAGCGAACG CACGTACCAC ACTGGCCGCA
TTGTGTATCG GTTTGGCCGC GGTCCTTGCG GCCAGTGCCT ACATCCACTG GTGGCGTGTG
CAGAAGGCCA TGCGTAGGGG AGAACCGCTC CCGCGTAACC CGATGCTGTT GGTGGTATCG
GTGACCGTGC TGGCCATCAC GGGTTACGCC GCGGTGCTGG TGATGTCGGG ATGA
 
Protein sequence
MTNRRDEDEE VEPDYRFTLA NERTFLAWTR TSFGLIAGGV AVHQLLPRFA TANARTTLAA 
LCIGLAAVLA ASAYIHWWRV QKAMRRGEPL PRNPMLLVVS VTVLAITGYA AVLVMSG