Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12890 |
Symbol | |
ID | 8386625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1328519 |
End bp | 1328872 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644975373 |
Product | predicted membrane protein |
Protein accession | YP_003133163 |
Protein GI | 257055331 |
COG category | [S] Function unknown |
COG ID | [COG2149] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACC GACGCGACGA AGACGAGGAA GTCGAGCCGG ACTATCGGTT CACTCTCGCC AACGAACGCA CCTTCCTGGC GTGGACCCGC ACCTCCTTCG GCCTCATCGC GGGAGGGGTC GCGGTACACC AGCTACTGCC CAGATTCGCC ACAGCGAACG CACGTACCAC ACTGGCCGCA TTGTGTATCG GTTTGGCCGC GGTCCTTGCG GCCAGTGCCT ACATCCACTG GTGGCGTGTG CAGAAGGCCA TGCGTAGGGG AGAACCGCTC CCGCGTAACC CGATGCTGTT GGTGGTATCG GTGACCGTGC TGGCCATCAC GGGTTACGCC GCGGTGCTGG TGATGTCGGG ATGA
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Protein sequence | MTNRRDEDEE VEPDYRFTLA NERTFLAWTR TSFGLIAGGV AVHQLLPRFA TANARTTLAA LCIGLAAVLA ASAYIHWWRV QKAMRRGEPL PRNPMLLVVS VTVLAITGYA AVLVMSG
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