Gene Svir_12540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12540 
Symbol 
ID8386591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1297194 
End bp1297790 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content63% 
IMG OID644975340 
Productnicotinate-nucleotide adenylyltransferase 
Protein accessionYP_003133130 
Protein GI257055298 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.950735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC GCCGTATCGG GGTCATGGGC GGCACGTTCG ACCCTATTCA CCACGGACAC 
CTCGTTGCCG CCAGTGAGGT GCAGCATCGT TTCGGGCTCG ATGAAGTGAT CTTCGTGCCC
ACCTGCCAGC CATGGCAGAA AGCGGGTCGT GAGGTGTCGG CGGCGGAGGA CCGTTACCTC
ATGACCGTGA TCGCCACCGC GTCCAACCCG GTGTTCTCGG TGAGTCGCGT GGACATCGAC
CGTGGTGGGC AGACGTACAC GGTGGACACG TTGCGTGATC TGCGGGTCGA ATATCCCGAC
GACGAGCTGT TCTTCATCAC CGGTGCCGAC GCGTTGGAAC AGATCCTCAC GTGGCGCGAT
GCCAACGAGT TGTTCACGCT CGCGCACTTC ATCGGCGTCA CCAGGCCGGG TTACCAGCTG
GACAACCACC ACCTGCCCGA GGGCAAGGTG AGCCTGGTCG AGGTCACCGC GATGGCGATC
TCGTCGACGG GATGCCGTGA GCGGGTGCGC AACGGGGAGC CCGTGTGGTA CCTCATGCCC
GACGGCGTGG TGCGCTACAT CAACAAGCGG AAGTTGTACG TTCGCGAGTC GTCCTGA
 
Protein sequence
MSARRIGVMG GTFDPIHHGH LVAASEVQHR FGLDEVIFVP TCQPWQKAGR EVSAAEDRYL 
MTVIATASNP VFSVSRVDID RGGQTYTVDT LRDLRVEYPD DELFFITGAD ALEQILTWRD
ANELFTLAHF IGVTRPGYQL DNHHLPEGKV SLVEVTAMAI SSTGCRERVR NGEPVWYLMP
DGVVRYINKR KLYVRESS