Gene Svir_12370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12370 
Symbol 
ID8386574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1277968 
End bp1279380 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content68% 
IMG OID644975323 
Productfolylpolyglutamate synthase/dihydrofolate synthase 
Protein accessionYP_003133113 
Protein GI257055281 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.867028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.34816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGATG ACGAGTCCGA CGTCGAACCG GTCGACGAGG CCGCGATCGA GGAACAGGCC 
CGTCGCGACT TGATCAGCGT GGAGGCCGAG CTCAACCGGC GTTGGCCCGA GACCAAGATC
GAGCCGTCGT TGACGCGGAT CTCCACTTTG GCGAACCTGC TCGGCGATCC GCAGCGCGCG
TATCCGGTGA TCCACATCGC GGGCACCAAC GGCAAGAGCT CGACCGCGCG GATGATCGAG
ACGCTGTTCA TGCACATGGG GCTGCGTGTC GGTCGGTACA CGAGCCCTCA CCTGCAGTTG
GTGACCGAGC GCATCAGCAT CGACGGGGTG CCGATCTCCC CCGAGACCTA CGTCAAGACC
TACCGCGACG TCGAGCCGTT CGTGGCGATG GTCGACAACG CGACGGGGCC GAACGAGCCG
GCGATGAGCA AGTTCGAGGT GCTCACCGGC ATGGCGTTCG CCGCGTTCGC CGACGCGCCC
GTCGAGGTGG CGGTGCTGGA GACCGGTATG GGCGGACGGT GGGACGCCAC CAACATCGCC
GACGCCCAGA TCTCCGTGAT CACGCCCATC GGCATCGATC ACACCGAGTA CCTCGGCGAG
GACCGGCGTT CGATCGCGAC GGAGAAGGCC GGGATCATCA AGCCGGGCGG CATCGCCGTG
CTGGCCGAAC AACCCGCCGA TGCCGAACGG GCGCTGCTGG AACGTGCCGT CGAGGTGGAC
GCCACCGTCG CCAGGGCGGG CAGCGAGTTC GGTGTGCTCA ACCGCGACAT CGCCGTGGGC
GGACAGTTGC TCAGCCTGCA GGGGCTCGGC GGTGTGTACG ACGAGATCTT CCTGCCGTTG
CACGGTCGGC ACCAGGCCGA CAACGCGGCG CTCGCGCTCG CCGCCGTGGA GGCGTTCTTC
GGCGCGGGTA AGGAACGCCA GCTCGAAGTG GAGGTCGTAC GCGAAGCGTT CGCCGCGGTG
CAGACGCCGG GCAGGCTGGA GCGTGTCAAG GCCTCACCGA CCGTGTTGAT CGACGCCGCG
CACAATCCGC ACGGTGCCCT CGCATTGGCG AACACTGTGG ACGAAGAGTT CGCCTTCCGG
AAACTGGTCG CCGTGGTCGG GGTTTTGGGG GACAAGGACG CCACCGGGGT CCTCGAGGCT
CTCGAACCCG TGGTGTCCGA GATCGTCGTC ACCCAGAACT CGTCGCCGCG CGCGTTGTCC
GCCGACGAAC TCGCCACGCT CGCCTTGCCG ATCTTCGGGG AGGAGCGGGT GACGGTGGAG
CCGAGGCTCG ACTCGGCCAT CGATGCGGCC GTCACCCTCG TCGAACAGAC CGACGATCCT
GAGGAACCCC TGTCCGGTGG TGGTGTGCTC GTGACGGGTT CGGTGGTCAC GGCAGGGGAG
GCCCGCACGT TGTTCGGCAA GGAGCCCGCA TGA
 
Protein sequence
MPDDESDVEP VDEAAIEEQA RRDLISVEAE LNRRWPETKI EPSLTRISTL ANLLGDPQRA 
YPVIHIAGTN GKSSTARMIE TLFMHMGLRV GRYTSPHLQL VTERISIDGV PISPETYVKT
YRDVEPFVAM VDNATGPNEP AMSKFEVLTG MAFAAFADAP VEVAVLETGM GGRWDATNIA
DAQISVITPI GIDHTEYLGE DRRSIATEKA GIIKPGGIAV LAEQPADAER ALLERAVEVD
ATVARAGSEF GVLNRDIAVG GQLLSLQGLG GVYDEIFLPL HGRHQADNAA LALAAVEAFF
GAGKERQLEV EVVREAFAAV QTPGRLERVK ASPTVLIDAA HNPHGALALA NTVDEEFAFR
KLVAVVGVLG DKDATGVLEA LEPVVSEIVV TQNSSPRALS ADELATLALP IFGEERVTVE
PRLDSAIDAA VTLVEQTDDP EEPLSGGGVL VTGSVVTAGE ARTLFGKEPA