| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12260 |
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| Symbol | valS |
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| ID | 8386563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1262480 |
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| End bp | 1265128 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975312 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003133102 |
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| Protein GI | 257055270 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.53715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACA GCGCAGCGCG AAACACCGAT CTGCCCACTT CGTGGAACCC GGCCGAAGAA
GAGGCCGCGA TCTATCAGCG GTGGGTGTCG GCCGGCTACT TCGAGGCCGA TGCGGCGTCG
GACAAGCCGC CGTTTTCAAT CGTGCTTCCG CCGCCGAACG TCACCGGCAG CCTGCACATG
GGCCATGCGC TCAATCACAC GCTCATGGAC GCCATGACGC GGCGTCGGCG CATGCAGGGC
TACGAGGTGC TGTGGCTGCC CGGTATGGAC CACGCGGGTA TCGCCACCCA GAACGTGGTG
GAACGGGAGA TCGCGAAGGA AGGGCTGTCC CGTCACGATC TGGGGCGTGA GCGCTTCGTG
GAACGGGTCT GGGAGTGGAA GGCCGAGTAC GGCGGCAAGA TCCTGGACCA GATGAAGCGT
CTCGGTGACG GCGTGGACTG GTCGCGCGAG CGGTTCACCA TGGACGAGAG CCTGTCGCGC
GCCGTCCAGA CGATGTTCAA ACGGCTTTAC GACGACGGGC TCGTCTATCG GGCCGAACGC
ATCATCAACT GGTGCCCGCG GTGCATGACC GCGCTGTCCG ACATCGAGGT GGACCACTCC
GACGACGAGG GCGAGCTCGT CTCCATCCGC TACGGCGACG GTGACGCCTC CATCGTGGTG
GCCACGACGC GGGCCGAGAC GATGCTGGGT GACACGGCGG TGGCGGTGCA CCCGGACGAC
GAACGGTACG CGCACCTCGT GGGGACCGAG GTCGAACTCC CGCTGACGGG GCGGCGGATC
CCGATCGTGG CCGATGCCCA TGTCGACCCC GAGTTCGGAA CCGGGGCGGT GAAGGTCACG
CCCGCGCACG ACCCCAACGA CTTCGAGATC GGCCGTCGGC ACGGCCTGGA CATGCCGACG
ATCATGGACG AGCGCGGTGT GATCACCGCG CACGGACCGT TCGAGGGCAT GGACCGGTTC
GAGGCCCGGC CGGCCATCGT GGCGGCACTG CGTGAGCAGG GTCGCATCGT GGCGGAGAAG
CGCCCCTACG TGCACGCGGT GGGGCACTGT TCGCGCTGCG ACACGGTGAT CGAGCCTCGC
CTGTCGTTGC AGTGGTGGGT GAAGGTCGAG CCGCTGGCGA AGGCCGCGGG CGACGCCGTG
CGGGACGGCC GGGTGAAGAT CCACCCGCCG GAGATGGCCA AGCGCTACTT CGACTGGGTC
GACAACATGC ACGACTGGAC CATCTCGCGC CAGTTGTGGT GGGGACATCG CATCCCGGTC
TGGTACGGCC CGAACGGCGA GACGGTGTGT GTCGGGCCGG ACGAGGAACC GCCCAGCGGC
GAGGGGTGGA CGCAGGACCC CGACGTGCTC GACACGTGGT TCTCGTCCGG GCTGTGGCCG
ATGTCCACGT TGGGCTGGCC CGAGCCGACC GACGATCTGG CGAAGTTCTA TCCGACCAGC
GTGTTGTCGA CCGGCTACGA CATCCTCTTC TTCTGGGTCG CCCGGATGAT GATGTTCGGC
CTGTACGGCA TGCGGGACAA CGGTCCGGAG CGATCGATCC CGTTCGAGCA TGTCTACCTG
CACGGGCTGA TCCGGGACGC GCACGGCAAG AAGATGTCGA AGTCCAGGGG CAACGTCATC
GACCCGCTGG ACTGGATGGA CCGGTTCGGC GCCGACGCCA CGCGGTTCAC CCTGGCGCGG
GGCGCCAACC CCGGTGCCGA CATGGCATTG GCCGAGGAGT GGGCCGCCGG GTCGCGCAAC
TTCTGCACGA AGCTGTGGAA CGCCACGCGT TTCGCGGTGG CCAACGGCGC CACGGTGGCG
ACGTCGGTGC CCGAGGCGGA CGAGCTCACC GAGGCCGACC GTTGGATCCT CGGCCGGCTC
TCGGCTGTCG CGTCCGAAGT GGACTCGTTG CTGGAGGACT TCCAGTTCGC CAAGGCCACC
AACCTGCTCT ACCACTTCAC GTGGGACGAG CTGTGCGACT GGTACCTGGA ACTGGCGAAG
GTGCAGTTGT CGGGGGAGAA GGCCGACAGC ACCCGGGTAG TGCTGGGTCG TGTCCTCGAC
GTGGTGTTGC GGCTGCTGCA CCCGTTCATC CCGTTCATCA CCGAACGGCT GTGGACGACG
CTCACCGGCG GTGAGTCGTT GGTGATCGCG GAGTGGCCCG TGGGTCCGGC GTGGACGTTC
GCGGCCGACA CCGAGGCGGA GACCCGGATC GCGGACGTGC AGAAGCTGGT CACGGAGATC
CGGCGATTCC GCTCGGACCA GGGCCTCAAG CCGGGACAGC GGGTCGCGAC CCGGTTGACC
GGCGAGGGGG TCGCCGCGAT CGCCGATCAC GAGGAGGCGG TGCGGTCGCT GACCAGGCTG
AGCGAGCCCG GCGACGCGTT CTCGGCGACG GCCTCGCTGG AGGTCGCCCT GTCGAGCGGC
CCGGTGACGG TGGAGATCGA CCTGTCCGGA GCGATCGACG TCGAGGCCGA ACGGAAGCGG
TTGCAGAAGG ACCTCGCCGC CGCGGAGAAG GAACTCAAGC AGAACGAGGG CAAGCTCAGC
AATCAGTCCT TCTTGGACAA GGCGCCGGCC GCGGTCGTCG AGAAGGTCCG GGCCCGGCGA
GACACCGCTC TTGCGGACAT CGAGCGCATC AAGGCCAGGC TGGACTCGTT GAGCTCGTTG
GGTTCGTGA
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| Protein sequence | MTDSAARNTD LPTSWNPAEE EAAIYQRWVS AGYFEADAAS DKPPFSIVLP PPNVTGSLHM
GHALNHTLMD AMTRRRRMQG YEVLWLPGMD HAGIATQNVV EREIAKEGLS RHDLGRERFV
ERVWEWKAEY GGKILDQMKR LGDGVDWSRE RFTMDESLSR AVQTMFKRLY DDGLVYRAER
IINWCPRCMT ALSDIEVDHS DDEGELVSIR YGDGDASIVV ATTRAETMLG DTAVAVHPDD
ERYAHLVGTE VELPLTGRRI PIVADAHVDP EFGTGAVKVT PAHDPNDFEI GRRHGLDMPT
IMDERGVITA HGPFEGMDRF EARPAIVAAL REQGRIVAEK RPYVHAVGHC SRCDTVIEPR
LSLQWWVKVE PLAKAAGDAV RDGRVKIHPP EMAKRYFDWV DNMHDWTISR QLWWGHRIPV
WYGPNGETVC VGPDEEPPSG EGWTQDPDVL DTWFSSGLWP MSTLGWPEPT DDLAKFYPTS
VLSTGYDILF FWVARMMMFG LYGMRDNGPE RSIPFEHVYL HGLIRDAHGK KMSKSRGNVI
DPLDWMDRFG ADATRFTLAR GANPGADMAL AEEWAAGSRN FCTKLWNATR FAVANGATVA
TSVPEADELT EADRWILGRL SAVASEVDSL LEDFQFAKAT NLLYHFTWDE LCDWYLELAK
VQLSGEKADS TRVVLGRVLD VVLRLLHPFI PFITERLWTT LTGGESLVIA EWPVGPAWTF
AADTEAETRI ADVQKLVTEI RRFRSDQGLK PGQRVATRLT GEGVAAIADH EEAVRSLTRL
SEPGDAFSAT ASLEVALSSG PVTVEIDLSG AIDVEAERKR LQKDLAAAEK ELKQNEGKLS
NQSFLDKAPA AVVEKVRARR DTALADIERI KARLDSLSSL GS
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