Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12200 |
Symbol | |
ID | 8386557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1257165 |
End bp | 1258454 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644975306 |
Product | ATP-dependent Clp protease ATP-binding subunit ClpX |
Protein accession | YP_003133096 |
Protein GI | 257055264 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TCGGCGACGG GGGAGACCTG CTGAAGTGCT CTTTCTGCGG TAAGAGCCAG AAACAGGTGA AAAAGCTCAT CGCCGGGCCC GGCGTGTACA TCTGTGACGA ATGCATCGAG CTGTGCAACG AGATCATCGA GGAAGAGCTC GCCGAGACGA ACGACGTCAA ACTCGATGAG TTGCCCAAAC CGGCCGACAT CCACGAGTTC CTCGAGCAGT ACATCATCGG CCAGGACGAT GCGAAGCGCA CCCTCGCCGT CGCGGTGTAC AACCACTACA AGCGCATCAA GTCGGACGCG AGCGGTACCA AGGATTCCAA GGACGAGCCG GTGGAGTTGG CGAAGTCCAA CATCCTGATG CTCGGCCCCA CAGGGTGCGG TAAGACCTAC CTGGCTCAGA CGCTGGCGAA GCTGCTCAAC GTCCCCTTCG CGATCGCCGA CGCCACCGCG TTGACCGAAG CCGGTTACGT CGGCGAGGAC GTCGAGAACA TCCTGCTCAA GCTCATCCAG GCGGCCGACT ACGACGTCAA GCGCGCCGAG ACGGGCATCA TCTACATCGA CGAGGTCGAC AAGATCGCCC GTAAGTCCGA GAACCCGTCG ATCACCCGGG ACGTGTCGGG CGAAGGCGTG CAGCAGGCGC TGCTCAAGAT CCTGGAGGGC ACGACGGCGT CGGTACCTCC GCAAGGGGGA CGGAAACACC CCCACCAGGA GTTCATCCAG ATCGACACCA CGAACGTGTT GTTCATCGTG GCGGGTGCGT TCGCCGGCCT GGAGAAGATC ATCAACGATC GGATCGGCAA ACGTGGTATC GGTTTCGGAG CCGAGATCCG CACCAAGCAG GAGCTCGACG AGAGCGACAT CTTCAAAGAG GCGATGCCCG AGGATCTGAT CAAGTTCGGT CTGATCCCGG AGTTCATCGG TCGGCTGCCC GTCGTCGCCA GCGTCAGCAA TCTCGACAAG CAATCGCTCG TGCGCATCCT CACCGAACCG CGTAACGCGT TGACCAAGCA GTACAAGAAG TTGTTCGAGA TGGACAACGT GGAGCTGGAG TTCACCAAGA CGGCGCTGGA GGCGATCGCC GACCAGGCGC TGTTGCGGGG AACCGGCGCA CGCGGACTGC GCGCGATCAT GGAAGAGGTC CTGCAACCGG TGATGTACGA GATCCCGAGT CGCGACGACG TGGCGAAGGT GGTCATCACC GAACAGACCG TGCGGGAGAA CGTGAATCCC ACGATCGTGT CACGTCAGCC GACACGGCGG CAGCGGGAGC GTGGGGAGAA ATCGGCCTGA
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Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECIE LCNEIIEEEL AETNDVKLDE LPKPADIHEF LEQYIIGQDD AKRTLAVAVY NHYKRIKSDA SGTKDSKDEP VELAKSNILM LGPTGCGKTY LAQTLAKLLN VPFAIADATA LTEAGYVGED VENILLKLIQ AADYDVKRAE TGIIYIDEVD KIARKSENPS ITRDVSGEGV QQALLKILEG TTASVPPQGG RKHPHQEFIQ IDTTNVLFIV AGAFAGLEKI INDRIGKRGI GFGAEIRTKQ ELDESDIFKE AMPEDLIKFG LIPEFIGRLP VVASVSNLDK QSLVRILTEP RNALTKQYKK LFEMDNVELE FTKTALEAIA DQALLRGTGA RGLRAIMEEV LQPVMYEIPS RDDVAKVVIT EQTVRENVNP TIVSRQPTRR QRERGEKSA
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