| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12120 |
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| Symbol | |
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| ID | 8386549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1248315 |
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| End bp | 1250090 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975298 |
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| Product | predicted symporter |
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| Protein accession | YP_003133088 |
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| Protein GI | 257055256 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.593677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCA CCCTCGCCGT GGCACCGGTG GTGCTCACCA CCTTGGCCAT CGGATTGCTC
GGGGTCGCGG CGATGCGCAC GACCTCGGAC TTCCTCGTGG CCTCGCGCCG GGTGTCACCG
CTGCTGAACT CCGCCGCCGT GTCCGGTGAG TACCTGTCCG CGGCCTCGTT CTTGGGCGTG
GCCGGGCTCA TGGTGCGCGA CGGCGTCGGA GCCCTGTGGT ACCCGGTCGG ATTCACAGCG
GGCTACATCG CCATGCTCGC CCTGGTGGCC GCTCCCATGC GCAGATCAGG CGCCCTCACG
GTGCCGGATT TCGCCGAGGC CCGCCTCGGC TCGGTGACCC TGCGCCGCCT CGCCGCCGTG
GTGGTGCTGG TGATCAGCGT GCTGTACCTG GTGCCGCAGT TCCGCACGGC CGGGCTGGTG
CTCAGCGTCG TGAGCGGCAC ACCGTACTGG GTGGGCGTCA TCCTCTCCGG ACTCGCCGTC
AGCATCACGC TCGCACTCGG TGGGATGCGG GCGGCCACGT ACGTGCAGGC GTTCCAATTC
GTCCTGAAGT TGGTGCTGTT CATCGTTCCC GCCGCATGGC TGGTGGCCCA GGTCGGCCCG
GAGGTGCGGC AGGAGGCGCT GCATCCGGTC GAGTTCACCC ACTTCGAGGC GCAAACACCG
GTGTCCTTCC GGATCAGCGC CACGTTGGAG GTGCCCGAAG GTGTGCGGGT CGTGGACGAC
GACGGCGGCG TCTCCGAGAT CCCGCCGGGC GAGTGGCACG TCCCCGCCGG GGCCACCGTC
GTGTTCGCCC AGGGCAGCGC CGCACCGGTG TTGGAGGGCA GCACTGCACC CGGCGGACCG
GGGTGGGAAC GCCCCCTGCT CGACCTCGGC ACGCCGGAAC ACCCGCTGCT GGCGACGTGG
GCGGTGTTGC TGGCGACCAT GCTCGGCACC ATGGGGTTAC CGCACGTCAT CATGCGGTTC
CACACCAGTC CGGACGGCAG GGCGGCCCGA CGGACCGCGG CGCTCACGGT CGCGCTGCTC
GGGGTGTTCT ACATCTTCCC CGGCATCTAC GGGACGCTCG GCCGGGTACT GGTGCCCCAC
CTGTACCTCT CGGGAGCCAC CGACAGCGCC GTGGTGGCCT TGCCCGCACA GGTCGACCCG
GGGCCGCTCG GCGGTGTGTT CACCGGCCTG CTCACCGCAG GGGCGTTCGC CGCGTTTCTC
GCCACGTCAC TCGGCCTGCT GCTGGTGGTC GCCGGCGCCA TCTCCCACGA CCTCGTGCCC
GGTGGACTAC GGCAACTGCG GATGACCGTG GTGGGCGCTG CGATCGTGGT GCTCCTGTTG
GCGCTACCCG CCGTGTCCTT CGATGCGAGC ACGCTGGTGA CCTGGGGATT CACGGTGGCC
GCCTCGACGT TCTGCCCCCT GCTGGTACTC GGCATCTGGT GGTCGCGGCT GACCGCCGGA
GGCGCGATCG CGGGGGTGAC GGTCGGGCTG CTCGCCTCCT GCGGGGGCTT CGCCCTCGGG
ATCGCCGACC CACCGGTACC CGGCTGGGTG TCGATCCTGC TCATCCAGCC CGCGCCCTGG
TCGGTGCCGC TGGCGTTCGC CACGATGATC GTGGTGTCAC TGTTCGGCAG ACCTCAGCCC
TGGGCCACGG CGGCCATGCT GCGCCTGCAC CTCCACGAAC ACCGGCGCTC CCCGTTCGCG
GACCGCTCGG CCCTAGCCCG TGACCTAGGC CATTCATCGT GGTCGGCACG CCGTTCGTCT
GCCGTTCGTC GCATCACGCG CCGATTGGTC CGCTGA
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| Protein sequence | MIVTLAVAPV VLTTLAIGLL GVAAMRTTSD FLVASRRVSP LLNSAAVSGE YLSAASFLGV
AGLMVRDGVG ALWYPVGFTA GYIAMLALVA APMRRSGALT VPDFAEARLG SVTLRRLAAV
VVLVISVLYL VPQFRTAGLV LSVVSGTPYW VGVILSGLAV SITLALGGMR AATYVQAFQF
VLKLVLFIVP AAWLVAQVGP EVRQEALHPV EFTHFEAQTP VSFRISATLE VPEGVRVVDD
DGGVSEIPPG EWHVPAGATV VFAQGSAAPV LEGSTAPGGP GWERPLLDLG TPEHPLLATW
AVLLATMLGT MGLPHVIMRF HTSPDGRAAR RTAALTVALL GVFYIFPGIY GTLGRVLVPH
LYLSGATDSA VVALPAQVDP GPLGGVFTGL LTAGAFAAFL ATSLGLLLVV AGAISHDLVP
GGLRQLRMTV VGAAIVVLLL ALPAVSFDAS TLVTWGFTVA ASTFCPLLVL GIWWSRLTAG
GAIAGVTVGL LASCGGFALG IADPPVPGWV SILLIQPAPW SVPLAFATMI VVSLFGRPQP
WATAAMLRLH LHEHRRSPFA DRSALARDLG HSSWSARRSS AVRRITRRLV R
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